RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CARMIL3Q8ND23 1372 aa23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 LINC00301Q8NCQ3 95 aa23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 FOXP1Q9H334 677 aaPredicted RBP23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 PPP1R1BQ9UD71 204 aaPredicted RBP23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 NSFL1CQ9UNZ2 370 aaKnown RBP23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 RNASE9P60153 205 aaKnown RBP23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 TCHPQ9BT92 498 aa23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 CDCA7Q9BWT1 371 aaPredicted RBP23.48■■□□□ 1.35
TGFBR1-202ENST00000374994 CYP21A2P08686 494 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 CIAO1O76071 339 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 LONP1P36776 959 aaKnown RBP23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 REXO1Q8N1G1 1221 aaKnown RBP23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 A1BGP04217 495 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 TRAPPC10P48553 1259 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 LONRF2Q1L5Z9 754 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 CABLES1Q8TDN4 633 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 KDM3AQ9Y4C1 1321 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 VSIG1Q86XK7 387 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 STAMQ92783 540 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 EXOC4Q96A65 974 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 DNM3Q9UQ16 869 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 IGSF1Q8N6C5 1336 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 PDE6AP16499 860 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 BLIDQ8IZY5 108 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 ARHGAP24Q8N264 748 aa23.47■■□□□ 1.35
TGFBR1-202ENST00000374994 ERVV-2B6SEH9 535 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 RETREG2Q8NC44 543 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 ZSCAN10Q96SZ4 725 aaPredicted RBP23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 SH2D4AQ9H788 454 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 DDAH1O94760 285 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 BCRP11274 1271 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 PDE11AQ9HCR9 933 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 BTBD18B2RXH4 712 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 F8W031 263 aaPredicted RBP23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 COPB1P53618 953 aaKnown RBP23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 DPCR1Q3MIW9 517 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 SMTNP53814 917 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 EYA3Q99504 573 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 TXNDC16Q9P2K2 825 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 B4DLN1 442 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 CTNNA1P35221 906 aaKnown RBP23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 MAP2K2P36507 400 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 AMFRQ9UKV5 643 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 ARHGAP31Q2M1Z3 1444 aa23.46■■□□□ 1.35
TGFBR1-202ENST00000374994 PCK1P35558 622 aa23.45■■□□□ 1.35
TGFBR1-202ENST00000374994 BCAS4Q8TDM0 211 aa23.45■■□□□ 1.35
TGFBR1-202ENST00000374994 DENND2CQ68D51 928 aa23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 PNMA8AQ86V59 439 aaPredicted RBP23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 CUEDC2Q9H467 287 aa23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 EEF1GP26641 437 aaKnown RBP23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 DBNLQ9UJU6 430 aaKnown RBP23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 RESTQ13127 1097 aa23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 POLA2Q14181 598 aa23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 ENOX1Q8TC92 643 aaKnown RBP23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 TRAF3IP1Q8TDR0 691 aaPredicted RBP23.45■■□□□ 1.34
TGFBR1-202ENST00000374994 PSMB7Q99436 277 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 TRIM31Q9BZY9 425 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 ASIC3Q9UHC3 531 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 ZNF827Q17R98 1081 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 CCDC14Q49A88 953 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 DYMQ7RTS9 669 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 NEDD9Q14511 834 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 MCTP2Q6DN12 878 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 MYOCDQ8IZQ8 938 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 HOMER3Q9NSC5 361 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 RTCBQ9Y3I0 505 aaKnown RBP23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 TMEM2Q9UHN6 1383 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 VSTM4Q8IW00 320 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 SLFNL1Q499Z3 407 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 CEP85LQ5SZL2 805 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 GPCPD1Q9NPB8 672 aa23.44■■□□□ 1.34
TGFBR1-202ENST00000374994 OGFOD1Q8N543 542 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 CDK12Q9NYV4 1490 aaPredicted RBP23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 RNF40O75150 1001 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 CAPN7Q9Y6W3 813 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 GAS8O95995 478 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 RPN1P04843 607 aaKnown RBP23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 KIF23Q02241 960 aaPredicted RBP23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 NECTIN1Q15223 517 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 ZNF622Q969S3 477 aaKnown RBP eCLIP23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 MAST3O60307 1309 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 CLIC6Q96NY7 704 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 PCCAP05165 728 aaPredicted RBP23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 ACSBG1Q96GR2 724 aa23.43■■□□□ 1.34
TGFBR1-202ENST00000374994 ANAPC4Q9UJX5 808 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 SCG2P13521 617 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 RASSF2P50749 326 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 CASP14P31944 242 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 GKAP1Q5VSY0 366 aaPredicted RBP23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 FNBP1Q96RU3 617 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 TNKSO95271 1327 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 RGS16O15492 202 aaPredicted RBP23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 KCNQ3O43525 872 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 TFAP4Q01664 338 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 WDR78Q5VTH9 848 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 RNF26Q9BY78 433 aaPredicted RBP23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 TRIM37O94972 964 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 CCDC105Q8IYK2 499 aa23.42■■□□□ 1.34
TGFBR1-202ENST00000374994 GDAP1L1Q96MZ0 367 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms