RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 SH3GLB2Q9NR46 395 aa20.71■□□□□ 0.91
HLA-DQB1-201ENST00000374943 HPSEQ9Y251 543 aa20.71■□□□□ 0.91
HLA-DQB1-201ENST00000374943 hCG_1642624A0A1W2PR95 340 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 PALM3A6NDB9 673 aaPredicted RBP20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 PFKFB1P16118 471 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 PICALMQ13492 652 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 RESP18Q5W5W9 173 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TIGD1Q96MW7 591 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 KCNQ5Q9NR82 932 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 STX8Q9UNK0 236 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 CEP131Q9UPN4 1083 aa20.7■□□□□ 0.91
HLA-DQB1-201ENST00000374943 TOP1P11387 765 aaKnown RBP20.7■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ANO6Q4KMQ2 910 aa20.7■□□□□ 0.9
HLA-DQB1-201ENST00000374943 NPM3O75607 178 aaKnown RBP20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 AOC3Q16853 763 aa20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SHC4Q6S5L8 630 aa20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 STAG2Q8N3U4 1231 aa20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 KRI1Q8N9T8 703 aaKnown RBP20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 PDGFDQ9GZP0 370 aaPredicted RBP20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 EHD4Q9H223 541 aa20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ZNF219Q9P2Y4 722 aaPredicted RBP20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SERPINB13Q9UIV8 391 aa20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SERPINA10Q9UK55 444 aa20.69■□□□□ 0.9
HLA-DQB1-201ENST00000374943 IGKV6D-41A0A0C4DH26 115 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ZNF202O95125 648 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SMARCA1P28370 1054 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 STX1AQ16623 288 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CEP95Q96GE4 821 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SPZ1Q9BXG8 430 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CABP5Q9NP86 173 aa20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 BRCA1P38398 1863 aaKnown RBP20.68■□□□□ 0.9
HLA-DQB1-201ENST00000374943 BMP15O95972 392 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 HLA-DOAP06340 250 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 PTPREP23469 700 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CALML3P27482 149 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 TTLL6Q8N841 843 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 IDI2Q9BXS1 227 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 FBXO2Q9UK22 296 aaPredicted RBP20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 NOL7Q9UMY1 257 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 PCDHB6Q9Y5E3 794 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CCDC93Q567U6 631 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 KIAA0825Q8IV33 1275 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ZNF579Q8NAF0 562 aaKnown RBP20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 PSMD1Q99460 953 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SDF4Q9BRK5 362 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CBX8Q9HC52 389 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 USP25Q9UHP3 1055 aa20.67■□□□□ 0.9
HLA-DQB1-201ENST00000374943 COL2A1P02458 1487 aaPredicted RBP20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 TRIM75PA6NK02 468 aa20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SYKP43405 635 aa20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SLC35G1Q2M3R5 365 aa20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 RTKN2Q8IZC4 609 aa20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 MTMR4Q9NYA4 1195 aa20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SRPRBQ9Y5M8 271 aaKnown RBP20.66■□□□□ 0.9
HLA-DQB1-201ENST00000374943 PPIP5K2O43314 1243 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CYTH3O43739 400 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 C21orf2O43822 256 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 PARP1P09874 1014 aaKnown RBP20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 SHMT1P34896 483 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 TRAPPC10P48553 1259 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 NLRP5P59047 1200 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 NFIAQ12857 509 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 DHX36Q9H2U1 1008 aaKnown RBP20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ANO10Q9NW15 660 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ARFGEF1Q9Y6D6 1849 aa20.65■□□□□ 0.9
HLA-DQB1-201ENST00000374943 AKR1B1P15121 316 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 EARS2Q5JPH6 523 aaKnown RBP20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 GALNT17Q6IS24 598 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 ELOA2Q8IYF1 753 aaPredicted RBP20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 DAGLBQ8NCG7 672 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CCDC148Q8NFR7 591 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 CLIC6Q96NY7 704 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 DNAJC25Q9H1X3 360 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 KIAA1468Q9P260 1216 aa20.64■□□□□ 0.9
HLA-DQB1-201ENST00000374943 FAM205CA6NFA0 338 aa20.64■□□□□ 0.89
HLA-DQB1-201ENST00000374943 KLRF2D3W0D1 207 aa20.64■□□□□ 0.89
HLA-DQB1-201ENST00000374943 ZNF165P49910 485 aa20.64■□□□□ 0.89
HLA-DQB1-201ENST00000374943 YDJCA8MPS7 323 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 ESPNB1AK53 854 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 ADCY5O95622 1261 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 VEGFAP15692 232 aaPredicted RBP20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 KCNA3P22001 575 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 PPP4R3BQ5MIZ7 849 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 VPS33BQ9H267 617 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 BARHL2Q9NY43 387 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 CCDC39Q9UFE4 941 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 PCDHA4Q9UN74 947 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 FER1L6Q2WGJ9 1857 aa20.63■□□□□ 0.89
HLA-DQB1-201ENST00000374943 SNHG28P0DPA3 235 aa20.62■□□□□ 0.89
HLA-DQB1-201ENST00000374943 LUZP1Q86V48 1076 aa20.62■□□□□ 0.89
HLA-DQB1-201ENST00000374943 BLIDQ8IZY5 108 aa20.62■□□□□ 0.89
HLA-DQB1-201ENST00000374943 CCDC17Q96LX7 622 aa20.62■□□□□ 0.89
HLA-DQB1-201ENST00000374943 FAM198AQ9UFP1 575 aa20.62■□□□□ 0.89
HLA-DQB1-201ENST00000374943 KCNH3Q9ULD8 1083 aa20.62■□□□□ 0.89
HLA-DQB1-201ENST00000374943 M0R2N6 131 aa20.61■□□□□ 0.89
HLA-DQB1-201ENST00000374943 STXBP3O00186 592 aa20.61■□□□□ 0.89
HLA-DQB1-201ENST00000374943 TTLL1O95922 423 aa20.61■□□□□ 0.89
HLA-DQB1-201ENST00000374943 DPEP1P16444 411 aa20.61■□□□□ 0.89
HLA-DQB1-201ENST00000374943 IQCB1Q15051 598 aa20.61■□□□□ 0.89
HLA-DQB1-201ENST00000374943 ASPRV1Q53RT3 343 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms