RNA–Protein interactions for RNA: ENST00000374732.7

USP48-203, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2 BASIC

Gene USP48, Length 3,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-203ENST00000374732 OR8H2Q8N162 312 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 EPSTI1Q96J88 318 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 FAM126AQ9BYI3 521 aaPredicted RBP8.96□□□□□ -0.97
USP48-203ENST00000374732 DISC1Q9NRI5 854 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 C9orf78Q9NZ63 289 aaPredicted RBP8.96□□□□□ -0.97
USP48-203ENST00000374732 LCMT1Q9UIC8 334 aa8.96□□□□□ -0.97
USP48-203ENST00000374732 NSD2O96028 1365 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 MSH6P52701 1360 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 A6NJY4 79 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 SNX2O60749 519 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 ERLIN1O75477 346 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 HSD3B2P26439 372 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 ZC3H12BQ5HYM0 836 aaKnown RBP8.96□□□□□ -0.98
USP48-203ENST00000374732 PIBF1Q8WXW3 757 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 SQORQ9Y6N5 450 aa8.96□□□□□ -0.98
USP48-203ENST00000374732 LSM1O15116 133 aaKnown RBP8.95□□□□□ -0.98
USP48-203ENST00000374732 NDUFB5O43674 189 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 REC8O95072 547 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 STT3AP46977 705 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 SCNN1DP51172 638 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 CTAG1AP78358 180 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 IDI1Q13907 227 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 BECN1Q14457 450 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 SLC4A10Q6U841 1118 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 NFATC2IPQ8NCF5 419 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 B4GALNT2Q8NHY0 566 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 ERMNQ8TAM6 284 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 SPIRE2Q8WWL2 714 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 TACO1Q9BSH4 297 aaKnown RBP8.95□□□□□ -0.98
USP48-203ENST00000374732 PIH1D1Q9NWS0 290 aaKnown RBP8.95□□□□□ -0.98
USP48-203ENST00000374732 XPOTO43592 962 aaKnown RBP8.95□□□□□ -0.98
USP48-203ENST00000374732 LAMB3Q13751 1172 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 HS1BP3Q53T59 392 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 MMS22LQ6ZRQ5 1243 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 MAATS1Q7Z4T9 603 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 PGBD3Q8N328 593 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 APPBP2Q92624 585 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 SGCDQ92629 289 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 AP1M1Q9BXS5 423 aa8.95□□□□□ -0.98
USP48-203ENST00000374732 CPLX1O14810 134 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ABL1P00519 1130 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CYP2C19P33261 490 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 SERPINB4P48594 390 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 GPR162Q16538 588 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CLPPQ16740 277 aaPredicted RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 MUM1L1Q5H9M0 696 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ANO1Q5XXA6 986 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CATSPER4Q7RTX7 472 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 RASSF3Q86WH2 238 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CORO1BQ9BR76 489 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 FAM167BQ9BTA0 163 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 SYNCQ9H7C4 482 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 LGR6Q9HBX8 967 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 PDRG1Q9NUG6 133 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TSKSQ9UJT2 592 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 EVC2Q86UK5 1308 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TULP4Q9NRJ4 1543 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 MYO5BQ9ULV0 1848 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TRIM64A6NGJ6 449 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TRIM64BA6NI03 449 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 RGS20O76081 388 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 PRLRP16471 622 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ATF7P17544 494 aaPredicted RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 CHMLP26374 656 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 PRKAR2BP31323 418 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TUFMP49411 452 aaKnown RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 PAPOLAP51003 745 aaKnown RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 SCNN1BP51168 640 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 SEC13P55735 322 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CFAP161Q6P656 301 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TRMT2AQ8IZ69 625 aaKnown RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 RSAD2Q8WXG1 361 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 NLRP2Q9NX02 1062 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 SLC5A4Q9NY91 659 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ADAMTS13Q76LX8 1427 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ARPC4-TTLL3A0A0A6YYG9 625 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 TMOD1P28289 359 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 MXI1P50539 228 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CNGA3Q16281 694 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ZNF772Q68DY9 489 aaPredicted RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 KCT2Q8NC54 265 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 GPT2Q8TD30 523 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ADAMTS19Q8TE59 1207 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 SLC16A10Q8TF71 515 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 CLMNQ96JQ2 1002 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 RUFY1Q96T51 708 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 BRINP2Q9C0B6 783 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 ACBD3Q9H3P7 528 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 RABEP2Q9H5N1 569 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 HPS4Q9NQG7 708 aa8.94□□□□□ -0.98
USP48-203ENST00000374732 LUC7L2Q9Y383 392 aaKnown RBP8.94□□□□□ -0.98
USP48-203ENST00000374732 NBNO60934 754 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 STAM2O75886 525 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 PCP11498 1178 aaKnown RBP8.93□□□□□ -0.98
USP48-203ENST00000374732 LRP8Q14114 963 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 ZNF280CQ8ND82 737 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 WHAMMQ8TF30 809 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 SPATA17Q96L03 361 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 KRT82Q9NSB4 513 aa8.93□□□□□ -0.98
USP48-203ENST00000374732 ANKRD36BQ8N2N9 1353 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms