RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 AGXT2Q9BYV1 514 aa20.55■□□□□ 0.88
PFDN6-201ENST00000374606 K7ELQ4 463 aaPredicted RBP20.54■□□□□ 0.88
PFDN6-201ENST00000374606 MPHOSPH10O00566 681 aaKnown RBP20.54■□□□□ 0.88
PFDN6-201ENST00000374606 USP2O75604 605 aaPredicted RBP20.54■□□□□ 0.88
PFDN6-201ENST00000374606 FXR1P51114 621 aaKnown RBP eCLIP20.54■□□□□ 0.88
PFDN6-201ENST00000374606 WTAPQ15007 396 aa20.54■□□□□ 0.88
PFDN6-201ENST00000374606 CCDC178Q5BJE1 867 aa20.54■□□□□ 0.88
PFDN6-201ENST00000374606 PTPN18Q99952 460 aa20.54■□□□□ 0.88
PFDN6-201ENST00000374606 TBC1D2Q9BYX2 928 aa20.54■□□□□ 0.88
PFDN6-201ENST00000374606 ATAD5Q96QE3 1844 aa20.54■□□□□ 0.88
PFDN6-201ENST00000374606 OTOFQ9HC10 1997 aa20.54■□□□□ 0.88
PFDN6-201ENST00000374606 GDF11O95390 407 aa20.53■□□□□ 0.88
PFDN6-201ENST00000374606 MAP3K10Q02779 954 aa20.53■□□□□ 0.88
PFDN6-201ENST00000374606 ARHGEF6Q15052 776 aa20.53■□□□□ 0.88
PFDN6-201ENST00000374606 IGDCC4Q8TDY8 1250 aa20.53■□□□□ 0.88
PFDN6-201ENST00000374606 ZNF333Q96JL9 665 aa20.53■□□□□ 0.88
PFDN6-201ENST00000374606 GPHNQ9NQX3 736 aaPredicted RBP20.53■□□□□ 0.88
PFDN6-201ENST00000374606 NMT2O60551 498 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 LIFRP42702 1097 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 ABCB5Q2M3G0 1257 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 NFXL1Q6ZNB6 911 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 ENAHQ8N8S7 591 aaPredicted RBP20.52■□□□□ 0.88
PFDN6-201ENST00000374606 ZNF341Q9BYN7 854 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 LY9Q9HBG7 655 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 TCP11L1Q9NUJ3 509 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 LIMCH1Q9UPQ0 1083 aa20.52■□□□□ 0.88
PFDN6-201ENST00000374606 DOCK1Q14185 1865 aa20.52■□□□□ 0.87
PFDN6-201ENST00000374606 BRCA2P51587 3418 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 CCDC69A6NI79 296 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 CAP1Q01518 475 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 APOBRQ0VD83 1088 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 SEC23AQ15436 765 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 IFIT1BQ5T764 474 aaKnown RBP20.51■□□□□ 0.87
PFDN6-201ENST00000374606 TMEM179Q6ZVK1 233 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 OPTNQ96CV9 577 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 ZSCAN31Q96LW9 406 aaPredicted RBP20.51■□□□□ 0.87
PFDN6-201ENST00000374606 LARP6Q9BRS8 491 aaKnown RBP20.51■□□□□ 0.87
PFDN6-201ENST00000374606 ELP3Q9H9T3 547 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 CABP5Q9NP86 173 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 IL17RBQ9NRM6 502 aa20.51■□□□□ 0.87
PFDN6-201ENST00000374606 KLF18A0A0U1RQI7 1052 aa20.5■□□□□ 0.87
PFDN6-201ENST00000374606 SLC9C1Q4G0N8 1177 aa20.5■□□□□ 0.87
PFDN6-201ENST00000374606 PPP4R3BQ5MIZ7 849 aa20.5■□□□□ 0.87
PFDN6-201ENST00000374606 NBPF11Q86T75 865 aa20.5■□□□□ 0.87
PFDN6-201ENST00000374606 TMTC2Q8N394 836 aa20.5■□□□□ 0.87
PFDN6-201ENST00000374606 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.5■□□□□ 0.87
PFDN6-201ENST00000374606 TPCN1Q9ULQ1 816 aa20.5■□□□□ 0.87
PFDN6-201ENST00000374606 NAP1L2Q9ULW6 460 aaPredicted RBP20.5■□□□□ 0.87
PFDN6-201ENST00000374606 IGKV6D-41A0A0C4DH26 115 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 GOLGA8BA8MQT2 603 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 GH2P01242 217 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 RRP1BQ14684 758 aaKnown RBP20.49■□□□□ 0.87
PFDN6-201ENST00000374606 TAF1CQ15572 869 aaPredicted RBP20.49■□□□□ 0.87
PFDN6-201ENST00000374606 SGMS1Q86VZ5 419 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 DGKHQ86XP1 1220 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 CEP95Q96GE4 821 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 TMX3Q96JJ7 454 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 SENP2Q9HC62 589 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 ZFYVE28Q9HCC9 887 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 SH2B1Q9NRF2 756 aaPredicted RBP20.49■□□□□ 0.87
PFDN6-201ENST00000374606 DAXXQ9UER7 740 aaPredicted RBP20.49■□□□□ 0.87
PFDN6-201ENST00000374606 ZBTB21Q9ULJ3 1066 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 STX8Q9UNK0 236 aa20.49■□□□□ 0.87
PFDN6-201ENST00000374606 CAP2P40123 477 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 EVCP57679 992 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 SYNE3Q6ZMZ3 975 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 BRI3BPQ8WY22 251 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 KAT14Q9H8E8 782 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 BRPF3Q9ULD4 1205 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 COLQQ9Y215 455 aaPredicted RBP20.48■□□□□ 0.87
PFDN6-201ENST00000374606 SLC12A7Q9Y666 1083 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 PTCH2Q9Y6C5 1203 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 MYH4Q9Y623 1939 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 CEP290O15078 2479 aa20.48■□□□□ 0.87
PFDN6-201ENST00000374606 CCL15-CCL14A0A0B4J2E2 113 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 PHF20L1A8MW92 1017 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 CTNND1O60716 968 aaKnown RBP20.47■□□□□ 0.87
PFDN6-201ENST00000374606 LARGE1O95461 756 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 ICA1Q05084 483 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 SEPT2Q15019 361 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 CCL15Q16663 113 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 SHROOM1Q2M3G4 852 aaPredicted RBP20.47■□□□□ 0.87
PFDN6-201ENST00000374606 RCSD1Q6JBY9 416 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 APOA5Q6Q788 366 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 CLEC10AQ8IUN9 316 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 WRNIP1Q96S55 665 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 KANSL2Q9H9L4 492 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 GINM1Q9NU53 330 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 MTMR4Q9NYA4 1195 aa20.47■□□□□ 0.87
PFDN6-201ENST00000374606 TTLL1O95922 423 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 ASNSP08243 561 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 GTF2A2P52657 109 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 RAB3GAP1Q15042 981 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 ME3Q16798 604 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 CATIPQ7Z7H3 387 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 ZNF654Q8IZM8 581 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 ANKS1AQ92625 1134 aa20.46■□□□□ 0.87
PFDN6-201ENST00000374606 ZNF274Q96GC6 653 aaPredicted RBP20.46■□□□□ 0.87
PFDN6-201ENST00000374606 IPO9Q96P70 1041 aaKnown RBP20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms