RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 METTL13Q8N6R0 699 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 ORC3Q9UBD5 711 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 ADD3Q9UEY8 706 aaKnown RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 BCAP29Q9UHQ4 241 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 ATP2C2O75185 946 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 GABPB1Q06547 395 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 RRAGBQ5VZM2 374 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 CLEC4GQ6UXB4 293 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 RAB3IPQ96QF0 476 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 IMPG2Q9BZV3 1241 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 USP16Q9Y5T5 823 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 NDUFB9Q9Y6M9 179 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 STMN1P16949 149 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 ZSCAN20P17040 1043 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 TRPC3Q13507 836 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 ATL3Q6DD88 541 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 SMIM5Q71RC9 77 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 GPR161Q8N6U8 529 aaKnown RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 CNNM2Q9H8M5 875 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 BSDC1Q9NW68 430 aaPredicted RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 MROH5Q6ZUA9 1318 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 A0A1W2PP64 1363 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 PSMC4P43686 418 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 METAP2P50579 478 aaKnown RBP eCLIP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 SARNPP82979 210 aaKnown RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 TRIM14Q14142 442 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 CFAP157Q5JU67 520 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 AFAP1L2Q8N4X5 818 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 NAP1L4Q99733 375 aaKnown RBP7.02□□□□□ -1.29
PTPN3-202ENST00000374541 KRT23Q9C075 422 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 SYNCQ9H7C4 482 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 TXNDC16Q9P2K2 825 aa7.02□□□□□ -1.29
PTPN3-202ENST00000374541 CWF19L2Q2TBE0 894 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 IFIT1BQ5T764 474 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 UTP14CQ5TAP6 766 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 PHLDB2Q86SQ0 1253 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 SELENOSQ9BQE4 189 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 EXOC6BQ9Y2D4 811 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 RAG1P15918 1043 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 RPS12P25398 132 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 SNX16P57768 344 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 FSTL1Q12841 308 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 NEK1Q96PY6 1258 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 RAB23Q9ULC3 237 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 USP19O94966 1318 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 AATKQ6ZMQ8 1374 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 HSPA6P17066 643 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 MCM6Q14566 821 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 USP50Q70EL3 339 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 CNGA4Q8IV77 575 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 RNF168Q8IYW5 571 aaPredicted RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ANKRD13AQ8IZ07 590 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ARRDC4Q8NCT1 418 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 LINS1Q8NG48 757 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 PLEKHG2Q9H7P9 1386 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 HSPA1AP0DMV8 641 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 HSPA1BP0DMV9 641 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 LBX1P52954 281 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 MRPS9P82933 396 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 NEDD9Q14511 834 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ABCB5Q2M3G0 1257 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 CYP4F22Q6NT55 531 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC26Q8TAB7 109 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ESR2Q92731 530 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 PUS7Q96PZ0 661 aaKnown RBP7.01□□□□□ -1.29
PTPN3-202ENST00000374541 NUDT12Q9BQG2 462 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 NMRK2Q9NPI5 230 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ALDH1L1O75891 902 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ODR4Q5SWX8 454 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 PODNQ7Z5L7 613 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC63Q8NA47 563 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 CCDC42Q96M95 316 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 SLITRK6Q9H5Y7 841 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 RABGAP1Q9Y3P9 1069 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ABCA6Q8N139 1617 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 IL16Q14005 1332 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 SORBS3O60504 671 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 VWA3BQ502W6 1294 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 TMEM67Q5HYA8 995 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ATG3Q9NT62 314 aa7.01□□□□□ -1.29
PTPN3-202ENST00000374541 ELF1P32519 619 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 IGBP1P78318 339 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 RNF180Q86T96 592 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 TBC1D32Q96NH3 1257 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 RARBP10826 455 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 SYT1P21579 422 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 TERF1P54274 439 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 NAA25Q14CX7 972 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 USH1GQ495M9 461 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 RC3H1Q5TC82 1133 aaKnown RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 FAM117BQ6P1L5 589 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 SNX21Q969T3 373 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 GCNAQ96QF7 691 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 SEC62Q99442 399 aaKnown RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 METTL22Q9BUU2 404 aaPredicted RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 GLIS2Q9BZE0 524 aaPredicted RBP7□□□□□ -1.29
PTPN3-202ENST00000374541 DPYSL4O14531 572 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 STAT6P42226 847 aa7□□□□□ -1.29
PTPN3-202ENST00000374541 IRX4P78413 519 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms