RNA–Protein interactions for RNA: ENST00000373571.5

HDAC8-206, Transcript of histone deacetylase 8, humanhuman

TSL 5 BASIC

Gene HDAC8, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-206ENST00000373571 PFKFB3Q16875 520 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-206ENST00000373571 SLC4A8Q2Y0W8 1093 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 SPTY2D1Q68D10 685 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-206ENST00000373571 SPECC1LQ69YQ0 1117 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 TMEM139Q8IV31 216 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.03■□□□□ 0.64
HDAC8-206ENST00000373571 V9GYY5 206 aaPredicted RBP19.03■□□□□ 0.64
HDAC8-206ENST00000373571 USP17L8P0C7I0 530 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 VPS72Q15906 364 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 PIK3AP1Q6ZUJ8 805 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 FCHSD1Q86WN1 690 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 L2HGDHQ9H9P8 463 aa19.03■□□□□ 0.64
HDAC8-206ENST00000373571 RTCBQ9Y3I0 505 aaKnown RBP19.03■□□□□ 0.64
HDAC8-206ENST00000373571 IRS2Q9Y4H2 1338 aa19.02■□□□□ 0.64
HDAC8-206ENST00000373571 TNRC6CQ9HCJ0 1690 aaKnown RBP19.02■□□□□ 0.64
HDAC8-206ENST00000373571 ARHGAP6O43182 974 aa19.02■□□□□ 0.64
HDAC8-206ENST00000373571 CASP1P29466 404 aa19.02■□□□□ 0.64
HDAC8-206ENST00000373571 CT47A1Q5JQC4 288 aaPredicted RBP19.02■□□□□ 0.64
HDAC8-206ENST00000373571 RCSD1Q6JBY9 416 aa19.02■□□□□ 0.64
HDAC8-206ENST00000373571 C8orf37Q96NL8 207 aa19.02■□□□□ 0.64
HDAC8-206ENST00000373571 NPHP1O15259 732 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 KIF5BP33176 963 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 ETF1P62495 437 aaKnown RBP19.01■□□□□ 0.63
HDAC8-206ENST00000373571 DPYDQ12882 1025 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 KAT14Q9H8E8 782 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 CCNL1Q9UK58 526 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-206ENST00000373571 SBF2Q86WG5 1849 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 SPDYE4A6NLX3 237 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 VEGFAP15692 232 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-206ENST00000373571 TRAPPC10P48553 1259 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 KLHL10Q6JEL2 608 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 AMIGO3Q86WK7 504 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 REXO1L1PQ8IX06 675 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 NGLY1Q96IV0 654 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 GSDMAQ96QA5 445 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 BAG1Q99933 345 aaPredicted RBP19.01■□□□□ 0.63
HDAC8-206ENST00000373571 BAZ2BQ9UIF8 2168 aaKnown RBP19.01■□□□□ 0.63
HDAC8-206ENST00000373571 SYNRGQ9UMZ2 1314 aa19.01■□□□□ 0.63
HDAC8-206ENST00000373571 ZSCAN12O43309 604 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 CD44P16070 742 aaKnown RBP19■□□□□ 0.63
HDAC8-206ENST00000373571 USP5P45974 858 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 TFAP4Q01664 338 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 NR1I3Q14994 352 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 SPATA1Q5VX52 437 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
HDAC8-206ENST00000373571 TC2NQ8N9U0 490 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 ARHGEF1Q92888 912 aaKnown RBP19■□□□□ 0.63
HDAC8-206ENST00000373571 DNAI1Q9UI46 699 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 PHLPP2Q6ZVD8 1323 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 A0A1B0GTH6 734 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 ZBTB22O15209 634 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 LDHBP07195 334 aaKnown RBP19■□□□□ 0.63
HDAC8-206ENST00000373571 MCM7P33993 719 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 CUL4BQ13620 913 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 ELF2Q15723 593 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 CCDC93Q567U6 631 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 C12orf60Q5U649 245 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 FEZ1Q99689 392 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 ANKIB1Q9P2G1 1089 aa19■□□□□ 0.63
HDAC8-206ENST00000373571 ADAMTS3O15072 1205 aa18.99■□□□□ 0.63
HDAC8-206ENST00000373571 ADKP55263 362 aaKnown RBP18.99■□□□□ 0.63
HDAC8-206ENST00000373571 STX17P56962 302 aa18.99■□□□□ 0.63
HDAC8-206ENST00000373571 TRIM65Q6PJ69 517 aa18.99■□□□□ 0.63
HDAC8-206ENST00000373571 IL17RBQ9NRM6 502 aa18.99■□□□□ 0.63
HDAC8-206ENST00000373571 MKRN1Q9UHC7 482 aaKnown RBP18.99■□□□□ 0.63
HDAC8-206ENST00000373571 PPP2R2CQ9Y2T4 447 aa18.99■□□□□ 0.63
HDAC8-206ENST00000373571 STX10O60499 249 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 DGKHQ86XP1 1220 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 SMYD4Q8IYR2 804 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-206ENST00000373571 IQUBQ8NA54 791 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 PNMA1Q8ND90 353 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 ZNF397Q8NF99 534 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-206ENST00000373571 WDR66Q8TBY9 1149 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 STAMQ92783 540 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 DYNLL2Q96FJ2 89 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 NHSQ6T4R5 1651 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 CALML3P27482 149 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 E2F4Q16254 413 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 SLC51AQ86UW1 340 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 SH3RF3Q8TEJ3 882 aaPredicted RBP18.98■□□□□ 0.63
HDAC8-206ENST00000373571 XDHP47989 1333 aa18.98■□□□□ 0.63
HDAC8-206ENST00000373571 PPP1R3GB7ZBB8 358 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 IL17AQ16552 155 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 APTXQ7Z2E3 356 aaKnown RBP18.97■□□□□ 0.63
HDAC8-206ENST00000373571 BLIDQ8IZY5 108 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 GPKOWQ92917 476 aaPredicted RBP eCLIP18.97■□□□□ 0.63
HDAC8-206ENST00000373571 PYM1Q9BRP8 204 aaKnown RBP18.97■□□□□ 0.63
HDAC8-206ENST00000373571 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.97■□□□□ 0.63
HDAC8-206ENST00000373571 NT5C2P49902 561 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 GRAPQ13588 217 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 STAG2Q8N3U4 1231 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 GRAPLQ8TC17 118 aaPredicted RBP18.97■□□□□ 0.63
HDAC8-206ENST00000373571 ZMYND15Q9H091 742 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 MKNK2Q9HBH9 465 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 LEMD3Q9Y2U8 911 aa18.97■□□□□ 0.63
HDAC8-206ENST00000373571 ROBO3Q96MS0 1386 aa18.96■□□□□ 0.63
HDAC8-206ENST00000373571 DIXDC1Q155Q3 683 aa18.96■□□□□ 0.63
HDAC8-206ENST00000373571 KMT5BQ4FZB7 885 aa18.96■□□□□ 0.63
HDAC8-206ENST00000373571 CDKAL1Q5VV42 579 aa18.96■□□□□ 0.63
HDAC8-206ENST00000373571 PDXDC2PQ6P474 469 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms