RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 NEUROD6Q96NK8 337 aa9.27□□□□□ -0.93
GARNL3-201ENST00000373386 SCLT1Q96NL6 688 aa9.27□□□□□ -0.93
GARNL3-201ENST00000373386 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.27□□□□□ -0.93
GARNL3-201ENST00000373386 ATP8A1Q9Y2Q0 1164 aa9.27□□□□□ -0.93
GARNL3-201ENST00000373386 MAP3K15Q6ZN16 1313 aa9.27□□□□□ -0.93
GARNL3-201ENST00000373386 KAT6BQ8WYB5 2073 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 MMEP08473 750 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 POU5F1Q01860 360 aaKnown RBP9.26□□□□□ -0.93
GARNL3-201ENST00000373386 PKN1Q16512 942 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 FXNQ16595 210 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 LRRC24Q50LG9 513 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 ADALQ6DHV7 355 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 FAM114A1Q8IWE2 563 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 CCDC65Q8IXS2 484 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 MYO1HQ8N1T3 1032 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 CTCFLQ8NI51 663 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-201ENST00000373386 N4BP2L2Q92802 583 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-201ENST00000373386 NAT10Q9H0A0 1025 aaKnown RBP9.26□□□□□ -0.93
GARNL3-201ENST00000373386 BARX2Q9UMQ3 279 aaPredicted RBP9.26□□□□□ -0.93
GARNL3-201ENST00000373386 NUP98P52948 1817 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 ERVV-1B6SEH8 477 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 M0R2C6 588 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 CA8P35219 290 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 CORO7P57737 925 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 GSDMDP57764 484 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 PPP4CP60510 307 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 TIMM10P62072 90 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 UBE3CQ15386 1083 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 TTC39AQ5SRH9 613 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 GIGYF2Q6Y7W6 1299 aaKnown RBP9.26□□□□□ -0.93
GARNL3-201ENST00000373386 NYAP1Q6ZVC0 841 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 CEP57L1Q8IYX8 460 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 KCNG4Q8TDN1 519 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 PARD3BQ8TEW8 1205 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 VTI1AQ96AJ9 217 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 XAGE2Q96GT9 111 aa9.26□□□□□ -0.93
GARNL3-201ENST00000373386 A0A1B0GUA9 196 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 FOXP2O15409 715 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 STARD3NLO95772 234 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 A1BGP04217 495 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 HARSP12081 509 aaKnown RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 PTK7Q13308 1070 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 ALX1Q15699 326 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 NCOA7Q8NI08 942 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 DDX11Q96FC9 970 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 LRRC27Q9C0I9 530 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 KLHL42Q9P2K6 505 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 BCL9O00512 1426 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 CCDC69A6NI79 296 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 ERLIN1O75477 346 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 HOXA10P31260 410 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 APOBRQ0VD83 1088 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 SLFNL1Q499Z3 407 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 RRP12Q5JTH9 1297 aaKnown RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 C11orf96Q7Z7L8 435 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 KIAA0825Q8IV33 1275 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 EZH1Q92800 747 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 OSBP2Q969R2 916 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 ERO1AQ96HE7 468 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 MMADHCQ9H3L0 296 aaPredicted RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 TMOD3Q9NYL9 352 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 MCM8Q9UJA3 840 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 DIS3Q9Y2L1 958 aaKnown RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 FAM237AA0A1B0GTK4 181 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 IFIT5Q13325 482 aaKnown RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 FILIP1Q7Z7B0 1213 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 KIAA1328Q86T90 577 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 DHX40Q8IX18 779 aaKnown RBP9.25□□□□□ -0.93
GARNL3-201ENST00000373386 VGLL2Q8N8G2 317 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 TCP11Q8WWU5 503 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 ST7Q9NRC1 585 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 IMPACTQ9P2X3 320 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 MRFAP1Q9Y605 127 aa9.25□□□□□ -0.93
GARNL3-201ENST00000373386 ECM29Q5VYK3 1845 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 RTL9Q8NET4 1388 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 FDPSP14324 419 aaKnown RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 RANBP1P43487 201 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 PIP4K2AP48426 406 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 CCZ1BP86790 482 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 CCZ1P86791 482 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 SNX1Q13596 522 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 SDCCAG8Q86SQ7 713 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 ILDR1Q86SU0 546 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 PARP9Q8IXQ6 854 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 HDAC7Q8WUI4 952 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 GOLPH3LQ9H4A5 285 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 BCORQ6W2J9 1755 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 UQCRFS1P1P0C7P4 283 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 KCNJ6P48051 423 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 RCAN1P53805 252 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 CEBPZQ03701 1054 aaKnown RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 LAMB3Q13751 1172 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 FAAH2Q6GMR7 532 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 FMR1NBQ8N0W7 255 aaPredicted RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 CCAR2Q8N163 923 aaKnown RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 MRPS27Q92552 414 aaKnown RBP9.24□□□□□ -0.93
GARNL3-201ENST00000373386 MKS1Q9NXB0 559 aa9.24□□□□□ -0.93
GARNL3-201ENST00000373386 STK36Q9NRP7 1315 aa9.23□□□□□ -0.93
GARNL3-201ENST00000373386 CHD4Q14839 1912 aa9.23□□□□□ -0.93
GARNL3-201ENST00000373386 TRIM64CA6NLI5 447 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms