RNA–Protein interactions for RNA: ENST00000373316.4

PGK1-201, Transcript of phosphoglycerate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PGK1, Length 4,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGK1-201ENST00000373316 SEC62Q99442 399 aaKnown RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 CCDC87Q9NVE4 849 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 DBNLQ9UJU6 430 aaKnown RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 SLIT2O94813 1529 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 ADORA1P30542 326 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 HIBADHP31937 336 aaKnown RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 RFX5P48382 616 aaPredicted RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 SUSD4Q5VX71 490 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 IFT20Q8IY31 132 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 CCDC144CPQ8IYA2 1237 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 DIS3L2Q8IYB7 885 aaKnown RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 ZBTB38Q8NAP3 1195 aaPredicted RBP11.86□□□□□ -0.51
PGK1-201ENST00000373316 SPATA5Q8NB90 893 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 TAF5LO75529 589 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 FAM13AO94988 1023 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 RUFY4Q6ZNE9 571 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 SUPT20HQ8NEM7 779 aa11.86□□□□□ -0.51
PGK1-201ENST00000373316 VPS72Q15906 364 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 ZNF569Q5MCW4 686 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 SYT10Q6XYQ8 523 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 GNPATO15228 680 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 GTF2F1P35269 517 aaKnown RBP eCLIP11.85□□□□□ -0.511e-7■■■■■ 27.7
PGK1-201ENST00000373316 C3orf67Q6ZVT6 689 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 NLRP10Q86W26 655 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 CCDC82Q8N4S0 544 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 RETREG2Q8NC44 543 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 CHAMP1Q96JM3 812 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 RUNDC3BQ96NL0 473 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 IWS1Q96ST2 819 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 IMPG2Q9BZV3 1241 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 FOXP1Q9H334 677 aaPredicted RBP11.85□□□□□ -0.51
PGK1-201ENST00000373316 PLCB1Q9NQ66 1216 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 MCM9Q9NXL9 1143 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 PARP2Q9UGN5 583 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.85□□□□□ -0.51
PGK1-201ENST00000373316 MAP3K15Q6ZN16 1313 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
PGK1-201ENST00000373316 H7C1W4 665 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 NEBLO76041 1014 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 EVCP57679 992 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 ZMYM1Q5SVZ6 1142 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 GOLGA5Q8TBA6 731 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
PGK1-201ENST00000373316 NOX5Q96PH1 765 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 LRRC2Q9BYS8 371 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 TMEM63CQ9P1W3 806 aa11.85□□□□□ -0.51
PGK1-201ENST00000373316 EFCAB8A8MWE9 144 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 H7C1D1 291 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 ABCD1P33897 745 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
PGK1-201ENST00000373316 SNX16P57768 344 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 CHMP4BP1P59074 171 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 ME3Q16798 604 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 PPP1R2P3Q6NXS1 205 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 SLC17A8Q8NDX2 589 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 CACNA1FO60840 1977 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 AFDNP55196 1824 aaKnown RBP11.84□□□□□ -0.51
PGK1-201ENST00000373316 ACTN4O43707 911 aaKnown RBP11.84□□□□□ -0.51
PGK1-201ENST00000373316 CTNNA2P26232 953 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 SSR1P43307 286 aaKnown RBP11.84□□□□□ -0.51
PGK1-201ENST00000373316 TCEANC2Q96MN5 208 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 GOPCQ9HD26 462 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 SLC9C1Q4G0N8 1177 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 CCDC122Q5T0U0 273 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
PGK1-201ENST00000373316 CNKSR2Q8WXI2 1034 aa11.84□□□□□ -0.51
PGK1-201ENST00000373316 NOC4LQ9BVI4 516 aaKnown RBP11.84□□□□□ -0.51
PGK1-201ENST00000373316 TNNI2P48788 182 aa11.83□□□□□ -0.51
PGK1-201ENST00000373316 CTSWP56202 376 aa11.83□□□□□ -0.51
PGK1-201ENST00000373316 PPFIA1Q13136 1202 aa11.83□□□□□ -0.51
PGK1-201ENST00000373316 AK8Q96MA6 479 aa11.83□□□□□ -0.51
PGK1-201ENST00000373316 FRMD4BQ9Y2L6 1034 aa11.83□□□□□ -0.51
PGK1-201ENST00000373316 IKBKGQ9Y6K9 419 aa11.83□□□□□ -0.51
PGK1-201ENST00000373316 A0A1B0GVL5 298 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 CETN3O15182 167 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 ORC2Q13416 577 aaPredicted RBP11.83□□□□□ -0.52
PGK1-201ENST00000373316 NOSTRINQ8IVI9 506 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 MMRN2Q9H8L6 949 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 TAF6LQ9Y6J9 622 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 ARFGEF2Q9Y6D5 1785 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 DCAF8L1A6NGE4 600 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 GTPBP6O43824 516 aaPredicted RBP11.83□□□□□ -0.52
PGK1-201ENST00000373316 SEL1L2Q5TEA6 688 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 ATG9AQ7Z3C6 839 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 SECISBP2LQ93073 1101 aaKnown RBP11.83□□□□□ -0.52
PGK1-201ENST00000373316 TSNARE1Q96NA8 513 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 ATP8A2Q9NTI2 1148 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
PGK1-201ENST00000373316 TBC1D8BQ0IIM8 1120 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 WDR78Q5VTH9 848 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 USPL1Q5W0Q7 1092 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 CDC37L1Q7L3B6 337 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 GSDMAQ96QA5 445 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 LRRC4BQ9NT99 713 aa11.83□□□□□ -0.52
PGK1-201ENST00000373316 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
PGK1-201ENST00000373316 PAK2Q13177 524 aa11.82□□□□□ -0.52
PGK1-201ENST00000373316 HAUS4Q9H6D7 363 aa11.82□□□□□ -0.52
PGK1-201ENST00000373316 JAG2Q9Y219 1238 aa11.82□□□□□ -0.52
PGK1-201ENST00000373316 PHLPP2Q6ZVD8 1323 aa11.82□□□□□ -0.52
PGK1-201ENST00000373316 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms