RNA–Protein interactions for RNA: ENST00000373292.8

HDLBP-202, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 3,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-202ENST00000373292 PTGER2P43116 358 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 TMED8Q6PL24 325 aaPredicted RBP12.86□□□□□ -0.35
HDLBP-202ENST00000373292 BRAPQ7Z569 592 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 FSIP1Q8NA03 581 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 VAT1LQ9HCJ6 419 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 TCP11L1Q9NUJ3 509 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 MTMR4Q9NYA4 1195 aa12.86□□□□□ -0.35
HDLBP-202ENST00000373292 PALM3A6NDB9 673 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 TCP10L2B9ZVM9 353 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 RCAN1P53805 252 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 STK38Q15208 465 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 L1TD1Q5T7N2 865 aaKnown RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 TTBK2Q6IQ55 1244 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 SLF2Q8IX21 1173 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 FMR1NBQ8N0W7 255 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 CTCFLQ8NI51 663 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 TSPY26PQ9H489 355 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 ASTN2O75129 1339 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 IGKV6D-41A0A0C4DH26 115 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 CCDC196A0A1B0GTZ2 297 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 GDF11O95390 407 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 TAL1P17542 331 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 RASSF7Q02833 373 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 GRM4Q14833 912 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 ZNF396Q96N95 335 aaPredicted RBP12.85□□□□□ -0.35
HDLBP-202ENST00000373292 NUP62CLQ9H1M0 184 aa12.85□□□□□ -0.35
HDLBP-202ENST00000373292 FER1L6Q2WGJ9 1857 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 GREB1LQ9C091 1923 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-202ENST00000373292 NOVP48745 357 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 CXCL9Q07325 125 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 WWC2Q6AWC2 1192 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 CLIP2Q9UDT6 1046 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 FOXN1O15353 648 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 GNL2Q13823 731 aaKnown RBP12.84□□□□□ -0.35
HDLBP-202ENST00000373292 ADALQ6DHV7 355 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 HOMER1Q86YM7 354 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 SLC16A10Q8TF71 515 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 CLSTN2Q9H4D0 955 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 KLRF2D3W0D1 207 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 SCG2P13521 617 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 SLC16A2P36021 539 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 TRIM29Q14134 588 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 PFKFB3Q16875 520 aaPredicted RBP12.84□□□□□ -0.35
HDLBP-202ENST00000373292 NBPF9Q3BBW0 867 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 PSMD1Q99460 953 aa12.84□□□□□ -0.35
HDLBP-202ENST00000373292 MPHOSPH10O00566 681 aaKnown RBP12.83□□□□□ -0.36
HDLBP-202ENST00000373292 VIL1P09327 827 aaKnown RBP12.83□□□□□ -0.36
HDLBP-202ENST00000373292 PDHBP11177 359 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 CSPP1Q1MSJ5 1256 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 RSBN1LQ6PCB5 846 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-202ENST00000373292 ZSCAN29Q8IWY8 852 aaPredicted RBP12.83□□□□□ -0.36
HDLBP-202ENST00000373292 AMOTL1Q8IY63 956 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 TNMDQ9H2S6 317 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 RBM28Q9NW13 759 aaKnown RBP12.83□□□□□ -0.36
HDLBP-202ENST00000373292 PIM2Q9P1W9 311 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 ATP2B2Q01814 1243 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 UPF1Q92900 1129 aaKnown RBP eCLIP12.83□□□□□ -0.36
HDLBP-202ENST00000373292 SERPINA10Q9UK55 444 aa12.83□□□□□ -0.36
HDLBP-202ENST00000373292 PFKFB1P16118 471 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 RBM43Q6ZSC3 357 aaKnown RBP12.82□□□□□ -0.36
HDLBP-202ENST00000373292 KCTD1Q719H9 257 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 CCDC84Q86UT8 332 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-202ENST00000373292 LUZP1Q86V48 1076 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 IDI2Q9BXS1 227 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 MTFR1LQ9H019 292 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 FOXP1Q9H334 677 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-202ENST00000373292 BCS1LQ9Y276 419 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 A0A087X0B3 334 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 SPDYE2BA6NHP3 402 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 PPP1R11O60927 126 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-202ENST00000373292 YEATS4O95619 227 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 SPDYE6P0CI01 402 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 CALM1P0DP23 149 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 CALM2P0DP24 149 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 CALM3P0DP25 149 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 ISM2Q6H9L7 571 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 PIGSQ96S52 555 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 GPCPD1Q9NPB8 672 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 CNTNAP1P78357 1384 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 SNAP25P60880 206 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 TYRO3Q06418 890 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 ZNF174Q15697 407 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 IL17AQ16552 155 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 PIK3AP1Q6ZUJ8 805 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 C11orf57Q6ZUT1 292 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-202ENST00000373292 RTKN2Q8IZC4 609 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 SYAP1Q96A49 352 aaPredicted RBP12.82□□□□□ -0.36
HDLBP-202ENST00000373292 TMEM39BQ9GZU3 492 aa12.82□□□□□ -0.36
HDLBP-202ENST00000373292 SEPT2Q15019 361 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 MAP3K11Q16584 847 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 KIAA1755Q5JYT7 1200 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 NUP88Q99567 741 aaPredicted RBP12.81□□□□□ -0.36
HDLBP-202ENST00000373292 M0R2N6 131 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 AKAP17AQ02040 695 aaKnown RBP12.81□□□□□ -0.36
HDLBP-202ENST00000373292 FAM160A1Q05DH4 1040 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 MIGA2Q7L4E1 593 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 HEATR3Q7Z4Q2 680 aa12.81□□□□□ -0.36
HDLBP-202ENST00000373292 DNAJC25Q9H1X3 360 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms