RNA–Protein interactions for RNA: ENST00000372972.6

CSTF2-201, Transcript of cleavage stimulation factor subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF2, Length 1,958 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-201ENST00000372972 ZNF219Q9P2Y4 722 aaPredicted RBP15.36■□□□□ 0.05
CSTF2-201ENST00000372972 SAP30BPQ9UHR5 308 aaKnown RBP15.36■□□□□ 0.05
CSTF2-201ENST00000372972 BIN1O00499 593 aa15.36■□□□□ 0.05
CSTF2-201ENST00000372972 PFKFB3Q16875 520 aaPredicted RBP15.36■□□□□ 0.05
CSTF2-201ENST00000372972 DOK7Q18PE1 504 aa15.36■□□□□ 0.05
CSTF2-201ENST00000372972 MRFAP1L1Q96HT8 127 aa15.36■□□□□ 0.05
CSTF2-201ENST00000372972 GAKO14976 1311 aa15.36■□□□□ 0.05
CSTF2-201ENST00000372972 MYH6P13533 1939 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 USP17L3A6NCW0 530 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 USP17L4A6NCW7 530 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 GNAQP50148 359 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 RHBDL3P58872 404 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 USP17L1Q7RTZ2 530 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 EYA3Q99504 573 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 KCNF1Q9H3M0 494 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 CLIP2Q9UDT6 1046 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 HOOK1Q9UJC3 728 aaKnown RBP15.35■□□□□ 0.05
CSTF2-201ENST00000372972 BMP15O95972 392 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 RASA1P20936 1047 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 PTGS1P23219 599 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 NLRP5P59047 1200 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 GRIN1Q05586 938 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 NOLC1Q14978 699 aaKnown RBP eCLIP15.35■□□□□ 0.05
CSTF2-201ENST00000372972 NPY5RQ15761 445 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 EARS2Q5JPH6 523 aaKnown RBP15.35■□□□□ 0.05
CSTF2-201ENST00000372972 SPECC1Q5M775 1068 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 C16orf86Q6ZW13 317 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 CCDC186Q7Z3E2 898 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 SLC44A5Q8NCS7 719 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 TNFRSF25Q93038 417 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 SUGT1Q9Y2Z0 365 aa15.35■□□□□ 0.05
CSTF2-201ENST00000372972 FAM205CA6NFA0 338 aa15.34■□□□□ 0.05
CSTF2-201ENST00000372972 SMTNL1A8MU46 457 aa15.34■□□□□ 0.05
CSTF2-201ENST00000372972 CDK8P49336 464 aa15.34■□□□□ 0.05
CSTF2-201ENST00000372972 PNOCQ13519 176 aa15.34■□□□□ 0.05
CSTF2-201ENST00000372972 GRM4Q14833 912 aa15.34■□□□□ 0.05
CSTF2-201ENST00000372972 METTL16Q86W50 562 aaKnown RBP15.34■□□□□ 0.05
CSTF2-201ENST00000372972 FLT1P17948 1338 aa15.34■□□□□ 0.05
CSTF2-201ENST00000372972 G3V3G9 751 aa15.33■□□□□ 0.05
CSTF2-201ENST00000372972 MDM2Q00987 491 aaPredicted RBP15.33■□□□□ 0.05
CSTF2-201ENST00000372972 DCAF8Q5TAQ9 597 aa15.33■□□□□ 0.05
CSTF2-201ENST00000372972 SLC16A10Q8TF71 515 aa15.33■□□□□ 0.05
CSTF2-201ENST00000372972 C7orf43Q8WVR3 580 aa15.33■□□□□ 0.05
CSTF2-201ENST00000372972 NRBP1Q9UHY1 535 aa15.33■□□□□ 0.05
CSTF2-201ENST00000372972 C10orf71Q711Q0 1435 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 POLR2DO15514 142 aaKnown RBP15.33■□□□□ 0.04
CSTF2-201ENST00000372972 CALML3P27482 149 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 TPM4P67936 248 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 CCDC125Q86Z20 511 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 STAG2Q8N3U4 1231 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 KIAA1524Q8TCG1 905 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 TMEM47Q9BQJ4 181 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 CSRNP2Q9H175 543 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 SH3GLB2Q9NR46 395 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 MAD2L2Q9UI95 211 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 STX8Q9UNK0 236 aa15.33■□□□□ 0.04
CSTF2-201ENST00000372972 NAV1Q8NEY1 1877 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 ISM2Q6H9L7 571 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 KANK3Q6NY19 840 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 FOXP4Q8IVH2 680 aaPredicted RBP15.32■□□□□ 0.04
CSTF2-201ENST00000372972 CERS5Q8N5B7 392 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 NEDD1Q8NHV4 660 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 FERMT2Q96AC1 680 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 SPTLC3Q9NUV7 552 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 DAGLAQ9Y4D2 1042 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 PCDHA5Q9Y5H7 936 aa15.32■□□□□ 0.04
CSTF2-201ENST00000372972 IKBKBO14920 756 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 VEGFAP15692 232 aaPredicted RBP15.31■□□□□ 0.04
CSTF2-201ENST00000372972 TRAPPC10P48553 1259 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 TTC38Q5R3I4 469 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 LZTS2Q9BRK4 669 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 MXD3Q9BW11 206 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 DBNDD1Q9H9R9 158 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 TERF1P54274 439 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 ZNF174Q15697 407 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 SERTAD1Q9UHV2 236 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 PYCARDQ9ULZ3 195 aa15.31■□□□□ 0.04
CSTF2-201ENST00000372972 PALM3A6NDB9 673 aaPredicted RBP15.3■□□□□ 0.04
CSTF2-201ENST00000372972 F8W031 263 aaPredicted RBP15.3■□□□□ 0.04
CSTF2-201ENST00000372972 NCAPHQ15003 741 aa15.3■□□□□ 0.04
CSTF2-201ENST00000372972 POSTNQ15063 836 aa15.3■□□□□ 0.04
CSTF2-201ENST00000372972 NOM1Q5C9Z4 860 aaKnown RBP15.3■□□□□ 0.04
CSTF2-201ENST00000372972 PIK3AP1Q6ZUJ8 805 aa15.3■□□□□ 0.04
CSTF2-201ENST00000372972 KCNQ5Q9NR82 932 aa15.3■□□□□ 0.04
CSTF2-201ENST00000372972 R3HCC1Q9Y3T6 440 aaKnown RBP15.3■□□□□ 0.04
CSTF2-201ENST00000372972 WNT7AO00755 349 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 FOXN1O15353 648 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 ATP2C1P98194 919 aaPredicted RBP15.29■□□□□ 0.04
CSTF2-201ENST00000372972 NT5DC1Q5TFE4 455 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 USP49Q70CQ1 688 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 PODNQ7Z5L7 613 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 BLIDQ8IZY5 108 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 C17orf53Q8N3J3 647 aaPredicted RBP15.29■□□□□ 0.04
CSTF2-201ENST00000372972 CCDC34Q96HJ3 373 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 PCDHA4Q9UN74 947 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 SNED1Q8TER0 1413 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 ACTN4O43707 911 aaKnown RBP15.29■□□□□ 0.04
CSTF2-201ENST00000372972 C21orf2O43822 256 aa15.29■□□□□ 0.04
CSTF2-201ENST00000372972 PTGDRQ13258 359 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms