RNA–Protein interactions for RNA: ENST00000372330.3

MMP9-201, Transcript of matrix metallopeptidase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MMP9, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP9-201ENST00000372330 MAN1B1Q9UKM7 699 aa20.58■□□□□ 0.89
MMP9-201ENST00000372330 SAR1BQ9Y6B6 198 aa20.58■□□□□ 0.89
MMP9-201ENST00000372330 SARNPP82979 210 aaKnown RBP20.58■□□□□ 0.88
MMP9-201ENST00000372330 FILIP1LQ4L180 1135 aa20.58■□□□□ 0.88
MMP9-201ENST00000372330 IQCEQ6IPM2 695 aa20.58■□□□□ 0.88
MMP9-201ENST00000372330 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.88
MMP9-201ENST00000372330 ITIH6Q6UXX5 1313 aa20.57■□□□□ 0.88
MMP9-201ENST00000372330 CYP26C1Q6V0L0 522 aa20.57■□□□□ 0.88
MMP9-201ENST00000372330 E7EWF7 191 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 EZRP15311 586 aaKnown RBP20.56■□□□□ 0.88
MMP9-201ENST00000372330 MORC3Q14149 939 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 ZMYM1Q5SVZ6 1142 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 ALS2CLQ60I27 953 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 AENQ8WTP8 325 aaKnown RBP20.56■□□□□ 0.88
MMP9-201ENST00000372330 SAMSN1Q9NSI8 373 aaKnown RBP20.56■□□□□ 0.88
MMP9-201ENST00000372330 KLHL33A6NCF5 533 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 PPFIA3O75145 1194 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 SARSP49591 514 aaKnown RBP20.56■□□□□ 0.88
MMP9-201ENST00000372330 PTPAQ15257 358 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 PAPD7Q5XG87 772 aaKnown RBP20.56■□□□□ 0.88
MMP9-201ENST00000372330 ACRBPQ8NEB7 543 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 CPLX3Q8WVH0 158 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 ISCA1Q9BUE6 129 aa20.56■□□□□ 0.88
MMP9-201ENST00000372330 KIF28PB7ZC32 967 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 IFIT1P09914 478 aaKnown RBP20.55■□□□□ 0.88
MMP9-201ENST00000372330 PLCD1P51178 756 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 POSTNQ15063 836 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 APTXQ7Z2E3 356 aaKnown RBP20.55■□□□□ 0.88
MMP9-201ENST00000372330 MMS19Q96T76 1030 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 NBPF3Q9H094 633 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 SEMA3EO15041 775 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 TEX33O43247 280 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 RTN2O75298 545 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 PAX7P23759 505 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 CASP14P31944 242 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 NAP1L1P55209 391 aaKnown RBP20.55■□□□□ 0.88
MMP9-201ENST00000372330 SNCBQ16143 134 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 ADD3Q9UEY8 706 aaKnown RBP20.55■□□□□ 0.88
MMP9-201ENST00000372330 TOGARAM1Q9Y4F4 1720 aa20.55■□□□□ 0.88
MMP9-201ENST00000372330 GOLGA6L7A0A1B0GV03 622 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 SRRM3A6NNA2 597 aaPredicted RBP20.54■□□□□ 0.88
MMP9-201ENST00000372330 PUS3Q9BZE2 481 aaKnown RBP20.54■□□□□ 0.88
MMP9-201ENST00000372330 HAUS4Q9H6D7 363 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 ACTR5Q9H9F9 607 aaPredicted RBP20.54■□□□□ 0.88
MMP9-201ENST00000372330 TCIRG1Q13488 830 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 EMC10Q5UCC4 262 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 KANK3Q6NY19 840 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.54■□□□□ 0.88
MMP9-201ENST00000372330 EPN3Q9H201 632 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 BTG4Q9NY30 223 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 LAMA4Q16363 1823 aa20.54■□□□□ 0.88
MMP9-201ENST00000372330 ZMYM6O95789 1325 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 CPLX1O14810 134 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 CCDC57Q2TAC2 916 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 SPATA1Q5VX52 437 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 EHBP1Q8NDI1 1231 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 GDAP1L1Q96MZ0 367 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 CEP126Q9P2H0 1117 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 HSPD1P10809 573 aaKnown RBP20.53■□□□□ 0.88
MMP9-201ENST00000372330 SLC8A1P32418 973 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 SLC8A3P57103 927 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 TRIM14Q14142 442 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 CCDC13Q8IYE1 715 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 RUFY1Q96T51 708 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 TMOD3Q9NYL9 352 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
MMP9-201ENST00000372330 MAST3O60307 1309 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 RNF113AO15541 343 aaKnown RBP20.52■□□□□ 0.88
MMP9-201ENST00000372330 ABL1P00519 1130 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 GYPCP04921 128 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 TRIM28Q13263 835 aaKnown RBP20.52■□□□□ 0.88
MMP9-201ENST00000372330 BIRC2Q13490 618 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 NAIF1Q69YI7 327 aaPredicted RBP20.52■□□□□ 0.88
MMP9-201ENST00000372330 TRMT44Q8IYL2 757 aaKnown RBP20.52■□□□□ 0.88
MMP9-201ENST00000372330 MAP3K14Q99558 947 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 RABEP2Q9H5N1 569 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 ATP6V0A4Q9HBG4 840 aa20.52■□□□□ 0.88
MMP9-201ENST00000372330 CLNS1AP54105 237 aaKnown RBP20.52■□□□□ 0.87
MMP9-201ENST00000372330 GRIK3Q13003 919 aa20.52■□□□□ 0.87
MMP9-201ENST00000372330 SLC9C2Q5TAH2 1124 aa20.52■□□□□ 0.87
MMP9-201ENST00000372330 SLC40A1Q9NP59 571 aa20.52■□□□□ 0.87
MMP9-201ENST00000372330 SPEF2Q9C093 1822 aa20.51■□□□□ 0.87
MMP9-201ENST00000372330 MYBL2P10244 700 aa20.51■□□□□ 0.87
MMP9-201ENST00000372330 IFFO1Q0D2I5 559 aa20.51■□□□□ 0.87
MMP9-201ENST00000372330 TTC39AQ5SRH9 613 aa20.51■□□□□ 0.87
MMP9-201ENST00000372330 NAA35Q5VZE5 725 aa20.51■□□□□ 0.87
MMP9-201ENST00000372330 ABHD10Q9NUJ1 306 aa20.51■□□□□ 0.87
MMP9-201ENST00000372330 A0A0G2JLW4 131 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 FXR1P51114 621 aaKnown RBP eCLIP20.5■□□□□ 0.87
MMP9-201ENST00000372330 ERVK-24P63145 666 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 ZNF662Q6ZS27 426 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 PARP9Q8IXQ6 854 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 ARMC2Q8NEN0 867 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 MED15Q96RN5 788 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 DDX20Q9UHI6 824 aaKnown RBP20.5■□□□□ 0.87
MMP9-201ENST00000372330 ZNF330Q9Y3S2 320 aaPredicted RBP20.5■□□□□ 0.87
MMP9-201ENST00000372330 RNF187Q5TA31 235 aaPredicted RBP20.5■□□□□ 0.87
MMP9-201ENST00000372330 EMBQ6PCB8 327 aa20.5■□□□□ 0.87
MMP9-201ENST00000372330 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.5■□□□□ 0.87
MMP9-201ENST00000372330 SND1Q7KZF4 910 aaKnown RBP eCLIP20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms