RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 TNNQ9UQP3 1299 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 PALM3A6NDB9 673 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 SYT1P21579 422 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 PPFIA1Q13136 1202 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 CHST3Q7LGC8 479 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 MYRIPQ8NFW9 859 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 TBC1D5Q92609 795 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 DBNDD2Q9BQY9 259 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 EXOC1Q9NV70 894 aa15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 PRDM15P57071 1507 aaPredicted RBP15.59■□□□□ 0.09
RAPGEF1-202ENST00000372190 CNGA1P29973 690 aa15.58■□□□□ 0.09
RAPGEF1-202ENST00000372190 ARMC9Q7Z3E5 817 aa15.58■□□□□ 0.09
RAPGEF1-202ENST00000372190 NECAB1Q8N987 351 aa15.58■□□□□ 0.09
RAPGEF1-202ENST00000372190 KCNQ4P56696 695 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZBTB38Q8NAP3 1195 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 GOLGA5Q8TBA6 731 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 CCT6BQ92526 530 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 TSC22D3Q99576 134 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 FRMD4BQ9Y2L6 1034 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 SMC5Q8IY18 1101 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 MRPL46Q9H2W6 279 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 PPP1R12AO14974 1030 aaPredicted RBP15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 DYNC1I2Q13409 638 aaKnown RBP15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 TGFBRAP1Q8WUH2 860 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 SPDL1Q96EA4 605 aa15.58■□□□□ 0.08
RAPGEF1-202ENST00000372190 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 PSMD7P51665 324 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 MAPKAPK5Q8IW41 473 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 AFAP1L2Q8N4X5 818 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 E7EVH7 732 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 KRT2P35908 639 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 SPAG1Q07617 926 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZNF280CQ8ND82 737 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 KCNG4Q8TDN1 519 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 DNAJC25Q9H1X3 360 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 POLE3Q9NRF9 147 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 RMND1Q9NWS8 449 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 IL6STP40189 918 aaPredicted RBP15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 INF2Q27J81 1249 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZNF569Q5MCW4 686 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 GRAMD4Q6IC98 578 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 SCOCQ9UIL1 159 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 CDC42BPGQ6DT37 1551 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 RAD50Q92878 1312 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 STAT6P42226 847 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 PPP1R7Q15435 360 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 DALRD3Q5D0E6 543 aaKnown RBP15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 AOPEPQ8N6M6 819 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 GPR161Q8N6U8 529 aaKnown RBP15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 CCDC26Q8TAB7 109 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 SYNCQ9H7C4 482 aa15.57■□□□□ 0.08
RAPGEF1-202ENST00000372190 ESRRGP62508 458 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 DCAF15Q66K64 600 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 CCDC25Q86WR0 208 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 MRPS27Q92552 414 aaKnown RBP15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 CTTNBP2NLQ9P2B4 639 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 TET3O43151 1660 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 E9PMD0 336 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 DAAM1Q9Y4D1 1078 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 FAM169AQ9Y6X4 670 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 TCP10L2B9ZVM9 353 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 N4BP2L2Q92802 583 aaPredicted RBP15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 DACT1Q9NYF0 836 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 PTPDC1A2A3K4 754 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 JRKLQ9Y4A0 524 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 ERBB3P21860 1342 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 ADCY10Q96PN6 1610 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 RPSAP08865 295 aaKnown RBP15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 LIG3P49916 1009 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 SAAL1Q96ER3 474 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 MMRN2Q9H8L6 949 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 PKD2L1Q9P0L9 805 aa15.56■□□□□ 0.08
RAPGEF1-202ENST00000372190 SH3GL3Q99963 347 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 GOLGA6BA6NDN3 693 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 TSGA10Q9BZW7 698 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 ZBTB1Q9Y2K1 713 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 KDRP35968 1356 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 CCDC159P0C7I6 412 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 KIAA0825Q8IV33 1275 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 EFCAB13Q8IY85 973 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 NAP1L4Q99733 375 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 DNM1Q05193 864 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 ANKRD20A3Q5VUR7 823 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 CREB3L3Q68CJ9 461 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 PAIP2BQ9ULR5 123 aaKnown RBP15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 AATKQ6ZMQ8 1374 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 JCADQ9P266 1359 aa15.55■□□□□ 0.08
RAPGEF1-202ENST00000372190 PCCAP05165 728 aaPredicted RBP15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 TYRO3Q06418 890 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 APPBP2Q92624 585 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 TRIM47Q96LD4 638 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 DRC3Q9H069 523 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 RNF40O75150 1001 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 LMNB2Q03252 620 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 RPGRIP1Q96KN7 1286 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 SCNN1DP51172 638 aa15.54■□□□□ 0.08
RAPGEF1-202ENST00000372190 BLVRAP53004 296 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms