RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 DPP9Q86TI2 863 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 GPKOWQ92917 476 aaPredicted RBP eCLIP16.42■□□□□ 0.227e-7■■■■□ 19.5
NDC1-201ENST00000371429 IQCGQ9H095 443 aaKnown RBP16.42■□□□□ 0.22
NDC1-201ENST00000371429 NARFQ9UHQ1 456 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 AKR1B15C9JRZ8 316 aaPredicted RBP16.42■□□□□ 0.22
NDC1-201ENST00000371429 ZNF853P0CG23 659 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 KARSQ15046 597 aaKnown RBP16.42■□□□□ 0.22
NDC1-201ENST00000371429 SPOUT1Q5T280 376 aaKnown RBP16.42■□□□□ 0.22
NDC1-201ENST00000371429 NOSTRINQ8IVI9 506 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 AMNQ9BXJ7 453 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 KDM3AQ9Y4C1 1321 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 KRT9P35527 623 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 CEP112Q8N8E3 955 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 IGSF22Q8N9C0 903 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 TTLL11Q8NHH1 800 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 GJD4Q96KN9 370 aaPredicted RBP16.42■□□□□ 0.22
NDC1-201ENST00000371429 PALD1Q9ULE6 856 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 ZMYM6O95789 1325 aa16.42■□□□□ 0.22
NDC1-201ENST00000371429 USP14P54578 494 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 MRPS9P82933 396 aaKnown RBP16.41■□□□□ 0.22
NDC1-201ENST00000371429 NEK8Q86SG6 692 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 MAK16Q9BXY0 300 aaKnown RBP16.41■□□□□ 0.22
NDC1-201ENST00000371429 KANSL2Q9H9L4 492 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 BSDC1Q9NW68 430 aaPredicted RBP16.41■□□□□ 0.22
NDC1-201ENST00000371429 SHROOM2Q13796 1616 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 POSTNQ15063 836 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 DHX36Q9H2U1 1008 aaKnown RBP16.41■□□□□ 0.22
NDC1-201ENST00000371429 CLSTN2Q9H4D0 955 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 SYNMO15061 1565 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 CD19P15391 556 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 ARL1P40616 181 aaPredicted RBP16.41■□□□□ 0.22
NDC1-201ENST00000371429 SSH2Q76I76 1423 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 PPP1R9BQ96SB3 815 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 IWS1Q96ST2 819 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 COA1Q9GZY4 146 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 A0A1W2PRG0 241 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 SORBS3O60504 671 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 GDF11O95390 407 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 SNX16P57768 344 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 GALNT17Q6IS24 598 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 PLA2G4DQ86XP0 818 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 ANTXR1Q9H6X2 564 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 INCENPQ9NQS7 918 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 STAP2Q9UGK3 403 aa16.41■□□□□ 0.22
NDC1-201ENST00000371429 TTLL1O95922 423 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 PTPN12Q05209 780 aaKnown RBP16.4■□□□□ 0.22
NDC1-201ENST00000371429 POLA2Q14181 598 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 HLFQ16534 295 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 PI16Q6UXB8 463 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 RNF169Q8NCN4 708 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 LPXNO60711 386 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 PFKFB2O60825 505 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 FOSP01100 380 aaPredicted RBP16.4■□□□□ 0.22
NDC1-201ENST00000371429 ERCC3P19447 782 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.4■□□□□ 0.22
NDC1-201ENST00000371429 PLA2R1Q13018 1463 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 POLR3GO15318 223 aaPredicted RBP16.4■□□□□ 0.22
NDC1-201ENST00000371429 SPOPO43791 374 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 NOLC1Q14978 699 aaKnown RBP eCLIP16.4■□□□□ 0.22
NDC1-201ENST00000371429 DIXDC1Q155Q3 683 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 XKR9Q5GH70 373 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 MTUS1Q9ULD2 1270 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 HSF2BPO75031 334 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 ZBTB7AO95365 584 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 TECP42680 631 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 KRT26Q7Z3Y9 468 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 SLFN12Q8IYM2 578 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 SREK1Q8WXA9 508 aaKnown RBP16.4■□□□□ 0.22
NDC1-201ENST00000371429 ZSWIM6Q9HCJ5 1215 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 TNS3Q68CZ2 1445 aa16.4■□□□□ 0.22
NDC1-201ENST00000371429 TUBB4AP04350 444 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 ADRA2BP18089 450 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 ZNF569Q5MCW4 686 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 FAM102BQ5T8I3 360 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 ZBTB8OSQ8IWT0 167 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 CERKQ8TCT0 537 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 SUGCTQ9HAC7 445 aa16.39■□□□□ 0.22
NDC1-201ENST00000371429 TNNI1P19237 187 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 LIN9Q5TKA1 542 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 PLCD4Q9BRC7 762 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 ADD2P35612 726 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 TRIM14Q14142 442 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 GPBP1Q86WP2 473 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 CAPZA3Q96KX2 299 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 BAG1Q99933 345 aaPredicted RBP16.39■□□□□ 0.21
NDC1-201ENST00000371429 NACA2Q9H009 215 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 BLZF1Q9H2G9 400 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 OSBPP22059 807 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 ASPRV1Q53RT3 343 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 TEKT3Q9BXF9 490 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 PI4KBQ9UBF8 816 aa16.39■□□□□ 0.21
NDC1-201ENST00000371429 FERP16591 822 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 RDH13Q8NBN7 331 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 UTP14CQ5TAP6 766 aaKnown RBP16.38■□□□□ 0.21
NDC1-201ENST00000371429 NFE2L3Q9Y4A8 694 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 PCDHB13Q9Y5F0 798 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 TET3O43151 1660 aa16.38■□□□□ 0.21
NDC1-201ENST00000371429 PRPF6O94906 941 aaKnown RBP16.38■□□□□ 0.21
NDC1-201ENST00000371429 OR52Z1P0C646 297 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms