RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ANO1Q5XXA6 986 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 CIAPIN1Q6FI81 312 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 LRSAM1Q6UWE0 723 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 RASGRP2Q7LDG7 609 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 METTL16Q86W50 562 aaKnown RBP20.25■□□□□ 0.83
SSBP3-203ENST00000371319 NOSTRINQ8IVI9 506 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 MTMR14Q8NCE2 650 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 NLGN2Q8NFZ4 835 aa20.25■□□□□ 0.83
SSBP3-203ENST00000371319 ZNF70Q9UC06 446 aaPredicted RBP20.25■□□□□ 0.83
SSBP3-203ENST00000371319 SCG2P13521 617 aa20.24■□□□□ 0.83
SSBP3-203ENST00000371319 XBP1P17861 261 aa20.24■□□□□ 0.83
SSBP3-203ENST00000371319 OXER1Q8TDS5 423 aa20.24■□□□□ 0.83
SSBP3-203ENST00000371319 CCDC17Q96LX7 622 aa20.24■□□□□ 0.83
SSBP3-203ENST00000371319 LZTS2Q9BRK4 669 aa20.24■□□□□ 0.83
SSBP3-203ENST00000371319 MYH4Q9Y623 1939 aa20.24■□□□□ 0.83
SSBP3-203ENST00000371319 FAM196BA6NMK8 535 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 STK38Q15208 465 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 CLEC10AQ8IUN9 316 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 FOXP4Q8IVH2 680 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-203ENST00000371319 ZSCAN29Q8IWY8 852 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-203ENST00000371319 OGFOD1Q8N543 542 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 JDP2Q8WYK2 163 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 ZBED3Q96IU2 234 aaPredicted RBP20.23■□□□□ 0.83
SSBP3-203ENST00000371319 GRPEL1Q9HAV7 217 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 MTMR7Q9Y216 660 aa20.23■□□□□ 0.83
SSBP3-203ENST00000371319 CYTH3O43739 400 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 VEGFAP15692 232 aaPredicted RBP20.22■□□□□ 0.83
SSBP3-203ENST00000371319 MRE11P49959 708 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 PRELPP51888 382 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 RASSF7Q02833 373 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 NR5A1Q13285 461 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 NPY5RQ15761 445 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 SPDYE2Q495Y8 402 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 TATDN1Q6P1N9 297 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 BICD2Q8TD16 824 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 TMOD2Q9NZR1 351 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 PCDHA7Q9UN72 937 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 BAZ2BQ9UIF8 2168 aaKnown RBP20.22■□□□□ 0.83
SSBP3-203ENST00000371319 CNTNAP1P78357 1384 aa20.22■□□□□ 0.83
SSBP3-203ENST00000371319 CLRN2A0PK11 232 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 USP17L5A8MUK1 530 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 SPTLC2O15270 562 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 TTLL1O95922 423 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 PARP1P09874 1014 aaKnown RBP20.21■□□□□ 0.83
SSBP3-203ENST00000371319 GOLGA8HP0CJ92 632 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 XRCC6P12956 609 aaKnown RBP eCLIP20.21■□□□□ 0.831e-7■□□□□ 8.9
SSBP3-203ENST00000371319 PTPAQ15257 358 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 LRRC47Q8N1G4 583 aaKnown RBP20.21■□□□□ 0.83
SSBP3-203ENST00000371319 KCNG4Q8TDN1 519 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 SPZ1Q9BXG8 430 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 TCP10L2B9ZVM9 353 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 LETM1O95202 739 aaPredicted RBP20.21■□□□□ 0.83
SSBP3-203ENST00000371319 KRT2P35908 639 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 ME1P48163 572 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 TOB1P50616 345 aaPredicted RBP20.21■□□□□ 0.83
SSBP3-203ENST00000371319 SLC39A14Q15043 492 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 SF3A1Q15459 793 aaKnown RBP20.21■□□□□ 0.83
SSBP3-203ENST00000371319 USP17L2Q6R6M4 530 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 CCAR1Q8IX12 1150 aaKnown RBP20.21■□□□□ 0.83
SSBP3-203ENST00000371319 PIBF1Q8WXW3 757 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 GOLPH3LQ9H4A5 285 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 CLIP2Q9UDT6 1046 aa20.21■□□□□ 0.83
SSBP3-203ENST00000371319 KLRF2D3W0D1 207 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
SSBP3-203ENST00000371319 SNHG28P0DPA3 235 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 PDHBP11177 359 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 EIF6P56537 245 aaKnown RBP20.2■□□□□ 0.82
SSBP3-203ENST00000371319 TNIP1Q15025 636 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 SHROOM1Q2M3G4 852 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-203ENST00000371319 CERKLQ49MI3 558 aaPredicted RBP20.2■□□□□ 0.82
SSBP3-203ENST00000371319 FAM151AQ8WW52 585 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 TNFRSF25Q93038 417 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 TRIM34Q9BYJ4 488 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 DACT1Q9NYF0 836 aa20.2■□□□□ 0.82
SSBP3-203ENST00000371319 A0A1W2PQ27 194 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 A0A1W2PQ64 194 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 A0A1W2PQD8 194 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 SHTN1A0MZ66 631 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 NR1I2O75469 434 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 SMARCA1P28370 1054 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 ADALQ6DHV7 355 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 SH3GLB2Q9NR46 395 aa20.19■□□□□ 0.82
SSBP3-203ENST00000371319 DDX19AQ9NUU7 478 aaKnown RBP20.19■□□□□ 0.82
SSBP3-203ENST00000371319 EARS2Q5JPH6 523 aaKnown RBP20.18■□□□□ 0.82
SSBP3-203ENST00000371319 PPP4R3BQ5MIZ7 849 aa20.18■□□□□ 0.82
SSBP3-203ENST00000371319 AXDND1Q5T1B0 1012 aaPredicted RBP20.18■□□□□ 0.82
SSBP3-203ENST00000371319 FKBP1CQ5VVH2 108 aa20.18■□□□□ 0.82
SSBP3-203ENST00000371319 RBSNQ9H1K0 784 aa20.18■□□□□ 0.82
SSBP3-203ENST00000371319 CPVLQ9H3G5 476 aa20.18■□□□□ 0.82
SSBP3-203ENST00000371319 CLSTN2Q9H4D0 955 aa20.18■□□□□ 0.82
SSBP3-203ENST00000371319 FAM205CA6NFA0 338 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 ZNF280AP59817 542 aaPredicted RBP20.17■□□□□ 0.82
SSBP3-203ENST00000371319 ASPRV1Q53RT3 343 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 RILPL1Q5EBL4 403 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 ENGASEQ8NFI3 743 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 GPKOWQ92917 476 aaPredicted RBP eCLIP20.17■□□□□ 0.821e-8■■□□□ 12.3
SSBP3-203ENST00000371319 CSRNP1Q96S65 589 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 NUP62CLQ9H1M0 184 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 TSPY26PQ9H489 355 aa20.17■□□□□ 0.82
SSBP3-203ENST00000371319 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms