RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 ABCB5Q2M3G0 1257 aa18.28■□□□□ 0.52
RPF1-202ENST00000370656 ZNF697Q5TEC3 545 aa18.28■□□□□ 0.52
RPF1-202ENST00000370656 TMED8Q6PL24 325 aaPredicted RBP18.28■□□□□ 0.52
RPF1-202ENST00000370656 ARRDC4Q8NCT1 418 aa18.28■□□□□ 0.52
RPF1-202ENST00000370656 PIH1D3Q9NQM4 214 aaKnown RBP18.28■□□□□ 0.52
RPF1-202ENST00000370656 FLRT1Q9NZU1 646 aa18.28■□□□□ 0.52
RPF1-202ENST00000370656 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
RPF1-202ENST00000370656 DPP9Q86TI2 863 aa18.27■□□□□ 0.52
RPF1-202ENST00000370656 MIGA1Q8NAN2 632 aa18.27■□□□□ 0.52
RPF1-202ENST00000370656 GUCD1Q96NT3 240 aa18.27■□□□□ 0.52
RPF1-202ENST00000370656 LTBP2Q14767 1821 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 RLFQ13129 1914 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 STRNO43815 780 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 CYP2C19P33261 490 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 RTP1P59025 263 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 HDAC1Q13547 482 aaPredicted RBP18.26■□□□□ 0.51
RPF1-202ENST00000370656 SSH3Q8TE77 659 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 RPAP3Q9H6T3 665 aaPredicted RBP18.26■□□□□ 0.51
RPF1-202ENST00000370656 BTBD7Q9P203 1132 aa18.26■□□□□ 0.51
RPF1-202ENST00000370656 SPDYE16A6NNV3 312 aaPredicted RBP18.25■□□□□ 0.51
RPF1-202ENST00000370656 KBTBD13C9JR72 458 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 MAP3K12Q12852 859 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 MAGEB6Q8N7X4 407 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 NPLOC4Q8TAT6 608 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 SLC5A4Q9NY91 659 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 HOXC10Q9NYD6 342 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 ATP11BQ9Y2G3 1177 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
RPF1-202ENST00000370656 EYSQ5T1H1 3165 aa18.24■□□□□ 0.51
RPF1-202ENST00000370656 IGHDP01880 384 aa18.24■□□□□ 0.51
RPF1-202ENST00000370656 ATP8B2P98198 1209 aa18.24■□□□□ 0.51
RPF1-202ENST00000370656 OLFML2BQ68BL8 750 aa18.24■□□□□ 0.51
RPF1-202ENST00000370656 ACER1Q8TDN7 264 aa18.24■□□□□ 0.51
RPF1-202ENST00000370656 DBNLQ9UJU6 430 aaKnown RBP18.24■□□□□ 0.51
RPF1-202ENST00000370656 CYBAP13498 195 aa18.23■□□□□ 0.51
RPF1-202ENST00000370656 COG2Q14746 738 aa18.23■□□□□ 0.51
RPF1-202ENST00000370656 GJC2Q5T442 439 aaPredicted RBP18.23■□□□□ 0.51
RPF1-202ENST00000370656 RWDD1Q9H446 243 aaPredicted RBP18.23■□□□□ 0.51
RPF1-202ENST00000370656 NAV1Q8NEY1 1877 aa18.22■□□□□ 0.51
RPF1-202ENST00000370656 MYH8P13535 1937 aa18.22■□□□□ 0.51
RPF1-202ENST00000370656 POLR3DP05423 398 aaPredicted RBP18.22■□□□□ 0.51
RPF1-202ENST00000370656 ADORA2AP29274 412 aa18.22■□□□□ 0.51
RPF1-202ENST00000370656 SLC39A5Q6ZMH5 540 aa18.22■□□□□ 0.51
RPF1-202ENST00000370656 TRPV1Q8NER1 839 aa18.22■□□□□ 0.51
RPF1-202ENST00000370656 TANGO6Q9C0B7 1094 aa18.22■□□□□ 0.51
RPF1-202ENST00000370656 CCDC8Q9H0W5 538 aaPredicted RBP18.22■□□□□ 0.51
RPF1-202ENST00000370656 PRDM5Q9NQX1 630 aaPredicted RBP18.22■□□□□ 0.51
RPF1-202ENST00000370656 NOP58Q9Y2X3 529 aaKnown RBP18.22■□□□□ 0.51
RPF1-202ENST00000370656 PRUNE2Q8WUY3 3088 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 SEPT4O43236 478 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 SHMT1P34896 483 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 MB21D1Q8N884 522 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 SHCBP1Q8NEM2 672 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 MOV10L1Q9BXT6 1211 aaKnown RBP18.21■□□□□ 0.51
RPF1-202ENST00000370656 SPATC1LQ9H0A9 340 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 VCANP13611 3396 aa18.21■□□□□ 0.51
RPF1-202ENST00000370656 ZNFX1Q9P2E3 1918 aaKnown RBP18.2■□□□□ 0.5
RPF1-202ENST00000370656 MPHOSPH10O00566 681 aaKnown RBP18.2■□□□□ 0.5
RPF1-202ENST00000370656 IGHA2P01877 340 aa18.2■□□□□ 0.5
RPF1-202ENST00000370656 PLCD1P51178 756 aa18.2■□□□□ 0.5
RPF1-202ENST00000370656 SEPT2Q15019 361 aa18.2■□□□□ 0.5
RPF1-202ENST00000370656 SHHQ15465 462 aa18.2■□□□□ 0.5
RPF1-202ENST00000370656 EAF2Q96CJ1 260 aaPredicted RBP18.2■□□□□ 0.5
RPF1-202ENST00000370656 MROH8Q9H579 483 aa18.2■□□□□ 0.5
RPF1-202ENST00000370656 TLR7Q9NYK1 1049 aaKnown RBP18.2■□□□□ 0.5
RPF1-202ENST00000370656 A0A0G2JMZ2 1700 aa18.19■□□□□ 0.5
RPF1-202ENST00000370656 MAGEB6P1A0A0J9YX57 407 aa18.19■□□□□ 0.5
RPF1-202ENST00000370656 ERCC3P19447 782 aa18.19■□□□□ 0.5
RPF1-202ENST00000370656 TTF1Q15361 905 aaPredicted RBP18.19■□□□□ 0.5
RPF1-202ENST00000370656 RPAP2Q8IXW5 612 aaPredicted RBP18.19■□□□□ 0.5
RPF1-202ENST00000370656 MAFAQ8NHW3 353 aaPredicted RBP18.19■□□□□ 0.5
RPF1-202ENST00000370656 CDX2Q99626 313 aaPredicted RBP18.19■□□□□ 0.5
RPF1-202ENST00000370656 CRNKL1Q9BZJ0 848 aaKnown RBP18.19■□□□□ 0.5
RPF1-202ENST00000370656 SEMA6BQ9H3T3 888 aa18.19■□□□□ 0.5
RPF1-202ENST00000370656 GUCY1A2P33402 732 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 SMAD3P84022 425 aaKnown RBP18.18■□□□□ 0.5
RPF1-202ENST00000370656 PLS1Q14651 629 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 SNX17Q15036 470 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 TRIM60Q495X7 471 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 ANO1Q5XXA6 986 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 SMC5Q8IY18 1101 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 ABRAQ8N0Z2 381 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 BADQ92934 168 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 SH2D4AQ9H788 454 aa18.18■□□□□ 0.5
RPF1-202ENST00000370656 ADCYAP1R1P41586 468 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 GABPAQ06546 454 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 C9orf50Q5SZB4 431 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 C1orf53Q5VUE5 145 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 TMEM179Q6ZVK1 233 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 NCAPG2Q86XI2 1143 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 ERC1Q8IUD2 1116 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 SIRT2Q8IXJ6 389 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 RIOK1Q9BRS2 568 aaKnown RBP18.17■□□□□ 0.5
RPF1-202ENST00000370656 ANTXR1Q9H6X2 564 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 C1orf115Q9H7X2 142 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 PRDM6Q9NQX0 595 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 MCM9Q9NXL9 1143 aa18.17■□□□□ 0.5
RPF1-202ENST00000370656 SMCHD1A6NHR9 2005 aa18.16■□□□□ 0.5
RPF1-202ENST00000370656 COBLO75128 1261 aa18.16■□□□□ 0.5
RPF1-202ENST00000370656 FLOT1O75955 427 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms