RNA–Protein interactions for RNA: ENST00000370086.7

SSR4-203, Transcript of signal sequence receptor subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR4, Length 643 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-203ENST00000370086 TICAM2Q86XR7 235 aa17.27■□□□□ 0.36
SSR4-203ENST00000370086 GPRC5AQ8NFJ5 357 aa17.27■□□□□ 0.36
SSR4-203ENST00000370086 COA7Q96BR5 231 aa17.27■□□□□ 0.36
SSR4-203ENST00000370086 PAGR1Q9BTK6 254 aa17.27■□□□□ 0.36
SSR4-203ENST00000370086 KANSL2Q9H9L4 492 aa17.27■□□□□ 0.36
SSR4-203ENST00000370086 COL11A1P12107 1806 aaPredicted RBP17.26■□□□□ 0.35
SSR4-203ENST00000370086 PRDM1O75626 825 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 ERVK-9P63128 1117 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 ERVK-24P63145 666 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 ATP2B2Q01814 1243 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 PPARAQ07869 468 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 MCMDC2Q4G0Z9 681 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 GTF3C2Q8WUA4 911 aaPredicted RBP17.26■□□□□ 0.35
SSR4-203ENST00000370086 VCPKMTQ9H867 229 aa17.26■□□□□ 0.35
SSR4-203ENST00000370086 SPDYE16A6NNV3 312 aaPredicted RBP17.25■□□□□ 0.35
SSR4-203ENST00000370086 SDSP20132 328 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 IRF5Q13568 498 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 LBX2Q6XYB7 198 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 ZNF589Q86UQ0 364 aaPredicted RBP17.25■□□□□ 0.35
SSR4-203ENST00000370086 ZNF444Q8N0Y2 327 aaPredicted RBP17.25■□□□□ 0.35
SSR4-203ENST00000370086 SPICE1Q8N0Z3 855 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 PORCNQ9H237 461 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 SH2D4AQ9H788 454 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 GJD2Q9UKL4 321 aa17.25■□□□□ 0.35
SSR4-203ENST00000370086 KIAA0100Q14667 2235 aaKnown RBP17.24■□□□□ 0.35
SSR4-203ENST00000370086 IGKV6D-41A0A0C4DH26 115 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 ADCY3O60266 1144 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 ELNP15502 786 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 MTFR1Q15390 333 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 SLAIN1Q8ND83 568 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 LPAR1Q92633 364 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 TMEM106CQ9BVX2 250 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 TANGO6Q9C0B7 1094 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 INCENPQ9NQS7 918 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 BTBD7Q9P203 1132 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 RABGAP1Q9Y3P9 1069 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 TACC3Q9Y6A5 838 aa17.24■□□□□ 0.35
SSR4-203ENST00000370086 EN2P19622 333 aaPredicted RBP17.23■□□□□ 0.35
SSR4-203ENST00000370086 CTDSPL2Q05D32 466 aa17.23■□□□□ 0.35
SSR4-203ENST00000370086 COG2Q14746 738 aa17.23■□□□□ 0.35
SSR4-203ENST00000370086 ALX1Q15699 326 aa17.23■□□□□ 0.35
SSR4-203ENST00000370086 ZNF287Q9HBT7 754 aa17.23■□□□□ 0.35
SSR4-203ENST00000370086 NYAP2Q9P242 653 aa17.23■□□□□ 0.35
SSR4-203ENST00000370086 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 MKI67P46013 3256 aaKnown RBP17.22■□□□□ 0.35
SSR4-203ENST00000370086 WDR46O15213 610 aaKnown RBP17.22■□□□□ 0.35
SSR4-203ENST00000370086 FGAP02671 866 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 SLC3A2P08195 630 aaKnown RBP17.22■□□□□ 0.35
SSR4-203ENST00000370086 HSPD1P10809 573 aaKnown RBP17.22■□□□□ 0.35
SSR4-203ENST00000370086 MAPK4P31152 587 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 PDE4BQ07343 736 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 FAM47AQ5JRC9 791 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 PXYLP1Q8TE99 480 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 HOXC10Q9NYD6 342 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 BIN2Q9UBW5 565 aaPredicted RBP17.22■□□□□ 0.35
SSR4-203ENST00000370086 CLIP2Q9UDT6 1046 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 ANAPC4Q9UJX5 808 aa17.22■□□□□ 0.35
SSR4-203ENST00000370086 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.22■□□□□ 0.35
SSR4-203ENST00000370086 PLIN4Q96Q06 1357 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 GSPT1P15170 499 aaKnown RBP17.21■□□□□ 0.35
SSR4-203ENST00000370086 DSG3P32926 999 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 GPR142Q7Z601 462 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 NEDD1Q8NHV4 660 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 CEP95Q96GE4 821 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 GOPCQ9HD26 462 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 MTMR4Q9NYA4 1195 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 LAMA4Q16363 1823 aa17.21■□□□□ 0.35
SSR4-203ENST00000370086 RAD21O60216 631 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 FLOT1O75955 427 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 INHAP05111 366 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 TSPY3P0CV98 308 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 TSPY8P0CW00 308 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 CCL5P13501 91 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 TFAP4Q01664 338 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 FAM83BQ5T0W9 1011 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 TTC22Q5TAA0 569 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 CWC27Q6UX04 472 aaKnown RBP17.2■□□□□ 0.34
SSR4-203ENST00000370086 PLEKHH3Q7Z736 793 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 ATG4CQ96DT6 458 aa17.2■□□□□ 0.34
SSR4-203ENST00000370086 ZNFX1Q9P2E3 1918 aaKnown RBP17.19■□□□□ 0.34
SSR4-203ENST00000370086 F5H6K3 240 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 CYP2B6P20813 491 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 UBXN2AP68543 259 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 CCNA1P78396 465 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 KLRC3Q07444 240 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 MORN1Q5T089 497 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 CCAR1Q8IX12 1150 aaKnown RBP17.19■□□□□ 0.34
SSR4-203ENST00000370086 USP6NLQ92738 828 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 MKL1Q969V6 931 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 NUDT12Q9BQG2 462 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 UNC93B1Q9H1C4 597 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 DIAPH3Q9NSV4 1193 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 FBXO28Q9NVF7 368 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 ZMYM6O95789 1325 aa17.19■□□□□ 0.34
SSR4-203ENST00000370086 NDUFB10O96000 172 aa17.18■□□□□ 0.34
SSR4-203ENST00000370086 FGRP09769 529 aa17.18■□□□□ 0.34
SSR4-203ENST00000370086 SAMD1Q6SPF0 538 aaPredicted RBP17.18■□□□□ 0.34
SSR4-203ENST00000370086 LRRC47Q8N1G4 583 aaKnown RBP17.18■□□□□ 0.34
SSR4-203ENST00000370086 NUP88Q99567 741 aaPredicted RBP17.18■□□□□ 0.34
SSR4-203ENST00000370086 MOV10L1Q9BXT6 1211 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms