RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 SRBD1Q8N5C6 995 aaKnown RBP22.54■■□□□ 1.2
CHTOP-204ENST00000368694 FUT2Q10981 343 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 GPRC5DQ9NZD1 345 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 MAD2L2Q9UI95 211 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 CNTNAP5Q8WYK1 1306 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 ABCB5Q2M3G0 1257 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 SHROOM1Q2M3G4 852 aaPredicted RBP22.53■■□□□ 1.2
CHTOP-204ENST00000368694 PPP4R3BQ5MIZ7 849 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 CDAN1Q8IWY9 1227 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 STAG2Q8N3U4 1231 aa22.53■■□□□ 1.2
CHTOP-204ENST00000368694 ASTN2O75129 1339 aaPredicted RBP22.52■■□□□ 1.2
CHTOP-204ENST00000368694 hCG_1642624A0A1W2PR95 340 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 FIBPO43427 364 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 GNAQP50148 359 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 RASA3Q14644 834 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 KRT40Q6A162 431 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 TMEM179Q6ZVK1 233 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 RASGRP2Q7LDG7 609 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 HACL1Q9UJ83 578 aa22.52■■□□□ 1.2
CHTOP-204ENST00000368694 V9GY48 417 aaPredicted RBP22.52■■□□□ 1.2
CHTOP-204ENST00000368694 BAZ2BQ9UIF8 2168 aaKnown RBP22.52■■□□□ 1.2
CHTOP-204ENST00000368694 PRPF3O43395 683 aaKnown RBP22.51■■□□□ 1.19
CHTOP-204ENST00000368694 TRAK2O60296 914 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 PARP1P09874 1014 aaKnown RBP22.51■■□□□ 1.19
CHTOP-204ENST00000368694 KRT85P78386 507 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 GPR162Q16538 588 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 C9orf131Q5VYM1 1079 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 LMBRD1Q9NUN5 540 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 PIBF1Q8WXW3 757 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 KANSL2Q9H9L4 492 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 CABP5Q9NP86 173 aa22.51■■□□□ 1.19
CHTOP-204ENST00000368694 DDNO94850 711 aaPredicted RBP22.5■■□□□ 1.19
CHTOP-204ENST00000368694 GOLGA8HP0CJ92 632 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 SEPT2Q15019 361 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 USP17L2Q6R6M4 530 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 MIGA2Q7L4E1 593 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 RGS22Q8NE09 1264 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 PALM3A6NDB9 673 aaPredicted RBP22.5■■□□□ 1.19
CHTOP-204ENST00000368694 GH2P01242 217 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 ICA1Q05084 483 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 GNL2Q13823 731 aaKnown RBP22.5■■□□□ 1.19
CHTOP-204ENST00000368694 TRPM4Q8TD43 1214 aa22.5■■□□□ 1.19
CHTOP-204ENST00000368694 XBP1P17861 261 aa22.49■■□□□ 1.19
CHTOP-204ENST00000368694 USP48Q86UV5 1035 aa22.49■■□□□ 1.19
CHTOP-204ENST00000368694 USP17L5A8MUK1 530 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 KLRF2D3W0D1 207 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 PDHBP11177 359 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 EEF2P13639 858 aaKnown RBP22.48■■□□□ 1.19
CHTOP-204ENST00000368694 EPS15P42566 896 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 PKN1Q16512 942 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 CSPP1Q1MSJ5 1256 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 DDX49Q9Y6V7 483 aaKnown RBP22.48■■□□□ 1.19
CHTOP-204ENST00000368694 RAD21O60216 631 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 KIF23Q02241 960 aaPredicted RBP22.48■■□□□ 1.19
CHTOP-204ENST00000368694 RRP1BQ14684 758 aaKnown RBP22.48■■□□□ 1.19
CHTOP-204ENST00000368694 SKOR2Q2VWA4 1001 aaPredicted RBP22.48■■□□□ 1.19
CHTOP-204ENST00000368694 LZTS2Q9BRK4 669 aa22.48■■□□□ 1.19
CHTOP-204ENST00000368694 RBM27Q9P2N5 1060 aaKnown RBP22.48■■□□□ 1.19
CHTOP-204ENST00000368694 TBC1D12O60347 775 aa22.47■■□□□ 1.19
CHTOP-204ENST00000368694 LMOD1P29536 600 aaPredicted RBP22.47■■□□□ 1.19
CHTOP-204ENST00000368694 DEFB129Q9H1M3 183 aa22.47■■□□□ 1.19
CHTOP-204ENST00000368694 NYAP2Q9P242 653 aa22.47■■□□□ 1.19
CHTOP-204ENST00000368694 TFIP11Q9UBB9 837 aaKnown RBP22.47■■□□□ 1.19
CHTOP-204ENST00000368694 PGAP2Q9UHJ9 254 aa22.47■■□□□ 1.19
CHTOP-204ENST00000368694 KCNJ14Q9UNX9 436 aa22.47■■□□□ 1.19
CHTOP-204ENST00000368694 FRMPD2Q68DX3 1309 aaPredicted RBP22.47■■□□□ 1.19
CHTOP-204ENST00000368694 SAFBQ15424 915 aaKnown RBP eCLIP22.46■■□□□ 1.195e-7■■□□□ 12
CHTOP-204ENST00000368694 ANGEL2Q5VTE6 544 aaKnown RBP22.46■■□□□ 1.19
CHTOP-204ENST00000368694 VPS54Q9P1Q0 977 aa22.46■■□□□ 1.19
CHTOP-204ENST00000368694 KIF28PB7ZC32 967 aa22.46■■□□□ 1.19
CHTOP-204ENST00000368694 MMP1P03956 469 aa22.46■■□□□ 1.19
CHTOP-204ENST00000368694 JAG1P78504 1218 aa22.46■■□□□ 1.19
CHTOP-204ENST00000368694 BRAPQ7Z569 592 aa22.46■■□□□ 1.19
CHTOP-204ENST00000368694 TEPSINQ96N21 525 aa22.46■■□□□ 1.19
CHTOP-204ENST00000368694 SCG2P13521 617 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 ASPRV1Q53RT3 343 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 APOBEC3FQ8IUX4 373 aaKnown RBP22.45■■□□□ 1.18
CHTOP-204ENST00000368694 TMEM87AQ8NBN3 555 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 CPVLQ9H3G5 476 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 ATAD5Q96QE3 1844 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 PFKFB3Q16875 520 aaPredicted RBP22.45■■□□□ 1.18
CHTOP-204ENST00000368694 SCAND2PQ9GZW5 306 aaPredicted RBP22.45■■□□□ 1.18
CHTOP-204ENST00000368694 GGA3Q9NZ52 723 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 CFAP45Q9UL16 551 aa22.45■■□□□ 1.18
CHTOP-204ENST00000368694 ISY1Q9ULR0 285 aaKnown RBP22.45■■□□□ 1.18
CHTOP-204ENST00000368694 CYTH3O43739 400 aa22.44■■□□□ 1.18
CHTOP-204ENST00000368694 CCDC96Q2M329 555 aa22.44■■□□□ 1.18
CHTOP-204ENST00000368694 MKL1Q969V6 931 aa22.44■■□□□ 1.18
CHTOP-204ENST00000368694 SPATA32Q96LK8 384 aa22.44■■□□□ 1.18
CHTOP-204ENST00000368694 ZNF396Q96N95 335 aaPredicted RBP22.44■■□□□ 1.18
CHTOP-204ENST00000368694 SPZ1Q9BXG8 430 aa22.44■■□□□ 1.18
CHTOP-204ENST00000368694 SNHG28P0DPA3 235 aa22.43■■□□□ 1.18
CHTOP-204ENST00000368694 CEBPZQ03701 1054 aaKnown RBP22.43■■□□□ 1.18
CHTOP-204ENST00000368694 TPRNQ4KMQ1 711 aa22.43■■□□□ 1.18
CHTOP-204ENST00000368694 DIS3L2Q8IYB7 885 aaKnown RBP22.43■■□□□ 1.18
CHTOP-204ENST00000368694 GPCPD1Q9NPB8 672 aa22.43■■□□□ 1.18
CHTOP-204ENST00000368694 ZBTB21Q9ULJ3 1066 aa22.43■■□□□ 1.18
CHTOP-204ENST00000368694 DPY19L2Q6NUT2 758 aa22.43■■□□□ 1.18
CHTOP-204ENST00000368694 GADD45BO75293 160 aaPredicted RBP22.42■■□□□ 1.18
CHTOP-204ENST00000368694 HIRAP54198 1017 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms