RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 CCL14Q16627 93 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 WDR78Q5VTH9 848 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 POTEEQ6S8J3 1075 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 PLEKHH3Q7Z736 793 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 RHPN1Q8TCX5 695 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 C12orf42Q96LP6 360 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 RIOK1Q9BRS2 568 aaKnown RBP12.56□□□□□ -0.4
CLRN3-201ENST00000368671 NBPF3Q9H094 633 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 CABP5Q9NP86 173 aa12.56□□□□□ -0.4
CLRN3-201ENST00000368671 ZMYND8Q9ULU4 1186 aaPredicted RBP12.56□□□□□ -0.4
CLRN3-201ENST00000368671 CNMDO75829 334 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 XRCC5P13010 732 aaKnown RBP12.55□□□□□ -0.4
CLRN3-201ENST00000368671 CCND3P30281 292 aaPredicted RBP12.55□□□□□ -0.4
CLRN3-201ENST00000368671 SHMT1P34896 483 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 USP14P54578 494 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 CACNB2Q08289 660 aaPredicted RBP12.55□□□□□ -0.4
CLRN3-201ENST00000368671 TTF1Q15361 905 aaPredicted RBP12.55□□□□□ -0.4
CLRN3-201ENST00000368671 HSP90AB4PQ58FF6 505 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 MAP3K21Q5TCX8 1036 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 TRMT44Q8IYL2 757 aaKnown RBP12.55□□□□□ -0.4
CLRN3-201ENST00000368671 ACER1Q8TDN7 264 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 DNAJC2Q99543 621 aaKnown RBP12.55□□□□□ -0.4
CLRN3-201ENST00000368671 APBA2Q99767 749 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 OGDHLQ9ULD0 1010 aa12.55□□□□□ -0.4
CLRN3-201ENST00000368671 GOLIM4O00461 696 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 MPHOSPH10O00566 681 aaKnown RBP12.54□□□□□ -0.4
CLRN3-201ENST00000368671 PDE6AP16499 860 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 SYN1P17600 705 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 VCAM1P19320 739 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 MORN1Q5T089 497 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 SLC9C2Q5TAH2 1124 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 TMED8Q6PL24 325 aaPredicted RBP12.54□□□□□ -0.4
CLRN3-201ENST00000368671 CATSPERGQ6ZRH7 1159 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 CLASRPQ8N2M8 674 aaKnown RBP12.54□□□□□ -0.4
CLRN3-201ENST00000368671 USP6NLQ92738 828 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 CRNKL1Q9BZJ0 848 aaKnown RBP12.54□□□□□ -0.4
CLRN3-201ENST00000368671 KIAA1683Q9H0B3 1180 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
CLRN3-201ENST00000368671 MCM9Q9NXL9 1143 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 RABGAP1Q9Y3P9 1069 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 ZBED9Q6R2W3 1325 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 MYH8P13535 1937 aa12.54□□□□□ -0.4
CLRN3-201ENST00000368671 A0A1W2PPC1 479 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 SOX1O00570 391 aaPredicted RBP12.53□□□□□ -0.4
CLRN3-201ENST00000368671 GLRX3O76003 335 aaKnown RBP12.53□□□□□ -0.4
CLRN3-201ENST00000368671 IFIT2P09913 472 aaKnown RBP12.53□□□□□ -0.4
CLRN3-201ENST00000368671 GUCY1A2P33402 732 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 CCNA1P78396 465 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 MAP2K5Q13163 448 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 SEPT2Q15019 361 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
CLRN3-201ENST00000368671 SDR42E1Q8WUS8 393 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 KIF1BPQ96EK5 621 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 EDC3Q96F86 508 aaKnown RBP12.53□□□□□ -0.4
CLRN3-201ENST00000368671 BTBD7Q9P203 1132 aa12.53□□□□□ -0.4
CLRN3-201ENST00000368671 SPDYE16A6NNV3 312 aaPredicted RBP12.52□□□□□ -0.41
CLRN3-201ENST00000368671 CYP2D6P10635 497 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 MS4A1P11836 297 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 LCORLQ8N3X6 602 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 LRCH3Q96II8 777 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 ARMT1Q9H993 441 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 COG6Q9Y2V7 657 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 PFASO15067 1338 aa12.52□□□□□ -0.41
CLRN3-201ENST00000368671 TCRBV5S4A2TA0A5A2 114 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 HMMRO75330 724 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 PTPREP23469 700 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 GABPAQ06546 454 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 MFSD14CQ5VZR4 134 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
CLRN3-201ENST00000368671 SLC44A5Q8NCS7 719 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.51□□□□□ -0.41
CLRN3-201ENST00000368671 GDF15Q99988 308 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 FLRT1Q9NZU1 646 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 IVNS1ABPQ9Y6Y0 642 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 A0A0G2JMZ2 1700 aa12.51□□□□□ -0.41
CLRN3-201ENST00000368671 BAZ2AQ9UIF9 1905 aaKnown RBP12.5□□□□□ -0.41
CLRN3-201ENST00000368671 A0A1W2PRG0 241 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 SLC15A5A6NIM6 579 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 CNGA1P29973 690 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 BMP8BP34820 402 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 ATP2B2Q01814 1243 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 SLFNL1Q499Z3 407 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 LBX2Q6XYB7 198 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 SIRT2Q8IXJ6 389 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 NPLOC4Q8TAT6 608 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 DYNLL2Q96FJ2 89 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 TANGO6Q9C0B7 1094 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 BOLA2Q9H3K6 86 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 DCP1AQ9NPI6 582 aaPredicted RBP12.5□□□□□ -0.41
CLRN3-201ENST00000368671 DDX19BQ9UMR2 479 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 MYH7P12883 1935 aa12.5□□□□□ -0.41
CLRN3-201ENST00000368671 PRKAB2O43741 272 aa12.49□□□□□ -0.41
CLRN3-201ENST00000368671 RAB11FIP3O75154 756 aa12.49□□□□□ -0.41
CLRN3-201ENST00000368671 MBD4O95243 580 aa12.49□□□□□ -0.41
CLRN3-201ENST00000368671 COL6A1P12109 1028 aa12.49□□□□□ -0.41
CLRN3-201ENST00000368671 ADD2P35612 726 aa12.49□□□□□ -0.41
CLRN3-201ENST00000368671 MAGEA10P43363 369 aaPredicted RBP12.49□□□□□ -0.41
CLRN3-201ENST00000368671 GRB14Q14449 540 aa12.49□□□□□ -0.41
CLRN3-201ENST00000368671 LRRC26Q2I0M4 334 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms