RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 PSMD14O00487 310 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 POLD1P28340 1107 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 MARCKSP29966 332 aaPredicted RBP12.24□□□□□ -0.45
TPM3-212ENST00000368533 CCDC93Q567U6 631 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 RCSD1Q6JBY9 416 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 CCAR1Q8IX12 1150 aaKnown RBP12.24□□□□□ -0.45
TPM3-212ENST00000368533 NLGN2Q8NFZ4 835 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 OXER1Q8TDS5 423 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 ZNF592Q92610 1267 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 FEZ1Q99689 392 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 KAT14Q9H8E8 782 aa12.24□□□□□ -0.45
TPM3-212ENST00000368533 LRRC37AA6NMS7 1700 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 FAM205CA6NFA0 338 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 BTBD18B2RXH4 712 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 SF3A1Q15459 793 aaKnown RBP12.23□□□□□ -0.45
TPM3-212ENST00000368533 NOM1Q5C9Z4 860 aaKnown RBP12.23□□□□□ -0.45
TPM3-212ENST00000368533 PRMT6Q96LA8 375 aaPredicted RBP12.23□□□□□ -0.45
TPM3-212ENST00000368533 PCNTO95613 3336 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 GAKO14976 1311 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 WDR19Q8NEZ3 1342 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 AKR1B1P15121 316 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 RASSF7Q02833 373 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 TROAPQ12815 778 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 LRMPQ12912 555 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 SBK1Q52WX2 424 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 CCDC186Q7Z3E2 898 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 HOMER1Q86YM7 354 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 SLF2Q8IX21 1173 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 FBXL16Q8N461 479 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 PNMA1Q8ND90 353 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 GPKOWQ92917 476 aaPredicted RBP eCLIP12.23□□□□□ -0.451e-12■□□□□ 9.1
TPM3-212ENST00000368533 VEZTQ9HBM0 779 aa12.23□□□□□ -0.45
TPM3-212ENST00000368533 DDTLA6NHG4 134 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 ADAMTS3O15072 1205 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 AKAP17AQ02040 695 aaKnown RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 TRIM29Q14134 588 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 CDAN1Q8IWY9 1227 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 TRIM22Q8IYM9 498 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 CEP95Q96GE4 821 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 TMX1Q9H3N1 280 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 PIM2Q9P1W9 311 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 FRMPD2Q68DX3 1309 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 BECN2A8MW95 431 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 CTIFO43310 598 aaKnown RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 KINO60870 393 aaKnown RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 CDKL5O76039 1030 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 ZRSR1Q15695 479 aaKnown RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 CFAP100Q494V2 611 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 USP17L2Q6R6M4 530 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 SAMD1Q6SPF0 538 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 CRACR2BQ8N4Y2 399 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 SRBD1Q8N5C6 995 aaKnown RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 CTCFLQ8NI51 663 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 SHISA4Q96DD7 197 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 DDX41Q9UJV9 622 aaKnown RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 GDF11O95390 407 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 KIF23Q02241 960 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 STRIP1Q5VSL9 837 aa12.22□□□□□ -0.45
TPM3-212ENST00000368533 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.22□□□□□ -0.45
TPM3-212ENST00000368533 ORC4O43929 436 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 PLCG2P16885 1265 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 SPECC1Q5M775 1068 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 TMEM47Q9BQJ4 181 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 SDF4Q9BRK5 362 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 UBA5Q9GZZ9 404 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 NRBP1Q9UHY1 535 aa12.21□□□□□ -0.45
TPM3-212ENST00000368533 COL4A5P29400 1685 aa12.21□□□□□ -0.46
TPM3-212ENST00000368533 FMNL1O95466 1100 aaPredicted RBP12.21□□□□□ -0.46
TPM3-212ENST00000368533 IRX3P78415 501 aaPredicted RBP12.21□□□□□ -0.46
TPM3-212ENST00000368533 GABPB1Q06547 395 aaPredicted RBP12.21□□□□□ -0.46
TPM3-212ENST00000368533 C10orf71Q711Q0 1435 aa12.21□□□□□ -0.46
TPM3-212ENST00000368533 TIAM2Q8IVF5 1701 aa12.21□□□□□ -0.46
TPM3-212ENST00000368533 TPM3P06753 285 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 IFNAR1P17181 557 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 DALRD3Q5D0E6 543 aaKnown RBP12.2□□□□□ -0.46
TPM3-212ENST00000368533 DIS3L2Q8IYB7 885 aaKnown RBP12.2□□□□□ -0.46
TPM3-212ENST00000368533 TMTC2Q8N394 836 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 FSIP1Q8NA03 581 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 MTFR1LQ9H019 292 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 GJA3Q9Y6H8 435 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 CCDC66A2RUB6 948 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 STK38Q15208 465 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 KIF18AQ8NI77 898 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 RASGRP4Q8TDF6 673 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 UPF1Q92900 1129 aaKnown RBP eCLIP12.2□□□□□ -0.467e-32■■■■□ 24.9
TPM3-212ENST00000368533 OSBPL5Q9H0X9 879 aaPredicted RBP12.2□□□□□ -0.46
TPM3-212ENST00000368533 MAST2Q6P0Q8 1798 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 NAV1Q8NEY1 1877 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 MYH1P12882 1939 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 KIAA1551Q9HCM1 1747 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 EGFRP00533 1210 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 FAM163AQ96GL9 167 aaPredicted RBP12.2□□□□□ -0.46
TPM3-212ENST00000368533 CLIP2Q9UDT6 1046 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 FAM198AQ9UFP1 575 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 SERPINB13Q9UIV8 391 aa12.2□□□□□ -0.46
TPM3-212ENST00000368533 A0A1B0GVL5 298 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 FGRP09769 529 aa12.19□□□□□ -0.46
TPM3-212ENST00000368533 EARS2Q5JPH6 523 aaKnown RBP12.19□□□□□ -0.46
TPM3-212ENST00000368533 MYSM1Q5VVJ2 828 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms