RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 CDK11BP21127 795 aaKnown RBP11.63□□□□□ -0.55
TPM3-209ENST00000368527 PPP1R2P41236 205 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 ST5P78524 1137 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 GRM4Q14833 912 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 PPP4R3BQ5MIZ7 849 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 SPATA1Q5VX52 437 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 ZNF444Q8N0Y2 327 aaPredicted RBP11.63□□□□□ -0.55
TPM3-209ENST00000368527 ANKRD20A12PQ8NF67 263 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 ZNF384Q8TF68 577 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 ERO1AQ96HE7 468 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 RBM17Q96I25 401 aaKnown RBP11.63□□□□□ -0.55
TPM3-209ENST00000368527 C8orf37Q96NL8 207 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 FEZ1Q99689 392 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 CCDC94Q9BW85 323 aaPredicted RBP11.63□□□□□ -0.55
TPM3-209ENST00000368527 NAA15Q9BXJ9 866 aaKnown RBP11.63□□□□□ -0.55
TPM3-209ENST00000368527 CUEDC2Q9H467 287 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 MKNK2Q9HBH9 465 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 MCM9Q9NXL9 1143 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 VPS54Q9P1Q0 977 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 ANKIB1Q9P2G1 1089 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 RGS17Q9UGC6 210 aaPredicted RBP11.63□□□□□ -0.55
TPM3-209ENST00000368527 USP21Q9UK80 565 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 SUGT1Q9Y2Z0 365 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 CASZ1Q86V15 1759 aa11.63□□□□□ -0.55
TPM3-209ENST00000368527 PHLPP2Q6ZVD8 1323 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 STX10O60499 249 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 PLEKHA8P1O95397 391 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 RBM10P98175 930 aaKnown RBP11.62□□□□□ -0.55
TPM3-209ENST00000368527 SLC27A3Q5K4L6 730 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 SPECC1LQ69YQ0 1117 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 ARMCX5Q6P1M9 558 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 BLIDQ8IZY5 108 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 CCDC82Q8N4S0 544 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 OXER1Q8TDS5 423 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 RPGRQ92834 1020 aaKnown RBP11.62□□□□□ -0.55
TPM3-209ENST00000368527 ERCC4Q92889 916 aaPredicted RBP11.62□□□□□ -0.55
TPM3-209ENST00000368527 FBXW7Q969H0 707 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 CCDC51Q96ER9 411 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 FAM163AQ96GL9 167 aaPredicted RBP11.62□□□□□ -0.55
TPM3-209ENST00000368527 HSD3B7Q9H2F3 369 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 TMX1Q9H3N1 280 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 FANCLQ9NW38 375 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 MKRN1Q9UHC7 482 aaKnown RBP11.62□□□□□ -0.55
TPM3-209ENST00000368527 PCDHA4Q9UN74 947 aa11.62□□□□□ -0.55
TPM3-209ENST00000368527 MYH6P13533 1939 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 GTPBP6O43824 516 aaPredicted RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 ONECUT3O60422 494 aaPredicted RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 TPM1P09493 284 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 PRDX5P30044 214 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 PRPHP41219 470 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 TBX2Q13207 712 aaPredicted RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 TRIM14Q14142 442 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 CRY2Q49AN0 593 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 FOXP4Q8IVH2 680 aaPredicted RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 SRBD1Q8N5C6 995 aaKnown RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 PNMA1Q8ND90 353 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 CCDC47Q96A33 483 aaKnown RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 AK8Q96MA6 479 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 PODXL2Q9NZ53 605 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 TFCP2L1Q9NZI6 479 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 SRP68Q9UHB9 627 aaKnown RBP11.61□□□□□ -0.55
TPM3-209ENST00000368527 NFE2L3Q9Y4A8 694 aa11.61□□□□□ -0.55
TPM3-209ENST00000368527 COL4A1P02462 1669 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 SLU7O95391 586 aaKnown RBP11.6□□□□□ -0.55
TPM3-209ENST00000368527 TSPY3P0CV98 308 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 TSPY8P0CW00 308 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 IL1R1P14778 569 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 TUBB4BP68371 445 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 TFAP4Q01664 338 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 DPYDQ12882 1025 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 PTGDRQ13258 359 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 SYMPKQ92797 1274 aaKnown RBP11.6□□□□□ -0.55
TPM3-209ENST00000368527 PAGE5Q96GU1 130 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 PPP1R13BQ96KQ4 1090 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 PANX2Q96RD6 677 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 CRAMP1Q96RY5 1269 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 SPZ1Q9BXG8 430 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 GGA1Q9UJY5 639 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 C10orf71Q711Q0 1435 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 ITIH6Q6UXX5 1313 aa11.6□□□□□ -0.55
TPM3-209ENST00000368527 TAF1LQ8IZX4 1826 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 CYP2D7A0A087X1C5 515 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
TPM3-209ENST00000368527 GPR75-ASB3A0A0A6YYF3 556 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 A0A1B0GTH6 734 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 CCDC194A0A1B0GVG4 234 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 PRDM1O75626 825 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 ATP1A3P13637 1013 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 GNA11P29992 359 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 HOXA10P31260 410 aaPredicted RBP11.59□□□□□ -0.55
TPM3-209ENST00000368527 ETF1P62495 437 aaKnown RBP11.59□□□□□ -0.55
TPM3-209ENST00000368527 STIM1Q13586 685 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 TUBB2AQ13885 445 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 NPY5RQ15761 445 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 E4F1Q66K89 784 aaPredicted RBP11.59□□□□□ -0.55
TPM3-209ENST00000368527 RCSD1Q6JBY9 416 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 KRT25Q7Z3Z0 450 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 PPFIBP1Q86W92 1011 aa11.59□□□□□ -0.55
TPM3-209ENST00000368527 NOC3LQ8WTT2 800 aaKnown RBP11.59□□□□□ -0.55
TPM3-209ENST00000368527 UBE2Q2Q8WVN8 375 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 136.4 ms