RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 CDC25BP30305 580 aa20.02■□□□□ 0.8
LMNA-205ENST00000368299 TRAPPC10P48553 1259 aa20.02■□□□□ 0.8
LMNA-205ENST00000368299 NLRP5P59047 1200 aa20.02■□□□□ 0.8
LMNA-205ENST00000368299 GLIPR1L2Q4G1C9 344 aa20.02■□□□□ 0.8
LMNA-205ENST00000368299 STX8Q9UNK0 236 aa20.02■□□□□ 0.8
LMNA-205ENST00000368299 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.01■□□□□ 0.79
LMNA-205ENST00000368299 G3V3G9 751 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 DCAF8Q5TAQ9 597 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 CNNM3Q8NE01 707 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 TMEM47Q9BQJ4 181 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 PDCL3Q9H2J4 239 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 MAD2L2Q9UI95 211 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 QSER1Q2KHR3 1735 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 FBXW7Q969H0 707 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 FERMT2Q96AC1 680 aa20.01■□□□□ 0.79
LMNA-205ENST00000368299 COL11A2P13942 1736 aaPredicted RBP20■□□□□ 0.79
LMNA-205ENST00000368299 SNED1Q8TER0 1413 aa20■□□□□ 0.79
LMNA-205ENST00000368299 UQCRHLA0A096LP55 91 aa20■□□□□ 0.79
LMNA-205ENST00000368299 UQCRHP07919 91 aa20■□□□□ 0.79
LMNA-205ENST00000368299 ATP2B1P20020 1258 aa20■□□□□ 0.79
LMNA-205ENST00000368299 DPCR1Q3MIW9 517 aa20■□□□□ 0.79
LMNA-205ENST00000368299 MRFAP1L1Q96HT8 127 aa20■□□□□ 0.79
LMNA-205ENST00000368299 STYK1Q6J9G0 422 aa20■□□□□ 0.79
LMNA-205ENST00000368299 PODNQ7Z5L7 613 aa20■□□□□ 0.79
LMNA-205ENST00000368299 SPC24Q8NBT2 197 aa20■□□□□ 0.79
LMNA-205ENST00000368299 PIBF1Q8WXW3 757 aa20■□□□□ 0.79
LMNA-205ENST00000368299 TTF2Q9UNY4 1162 aaKnown RBP20■□□□□ 0.79
LMNA-205ENST00000368299 FOCADQ5VW36 1801 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 PALM3A6NDB9 673 aaPredicted RBP19.99■□□□□ 0.79
LMNA-205ENST00000368299 LONRF3Q496Y0 759 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 GALNT17Q6IS24 598 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 KANK3Q6NY19 840 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 HHIPL2Q6UWX4 724 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 CERS5Q8N5B7 392 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 AOPEPQ8N6M6 819 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 ZNF622Q969S3 477 aaKnown RBP eCLIP19.99■□□□□ 0.792e-8■■□□□ 11.8
LMNA-205ENST00000368299 TTC12Q9H892 705 aaPredicted RBP19.99■□□□□ 0.79
LMNA-205ENST00000368299 MYH1P12882 1939 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 TPM4P67936 248 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 EARS2Q5JPH6 523 aaKnown RBP19.99■□□□□ 0.79
LMNA-205ENST00000368299 TTC38Q5R3I4 469 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 C2CD5Q86YS7 1000 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 DRC7Q8IY82 874 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 STAG2Q8N3U4 1231 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 CCDC34Q96HJ3 373 aa19.99■□□□□ 0.79
LMNA-205ENST00000368299 TNS1Q9HBL0 1735 aaKnown RBP19.98■□□□□ 0.79
LMNA-205ENST00000368299 SMTNL1A8MU46 457 aa19.98■□□□□ 0.79
LMNA-205ENST00000368299 H0YIN7 160 aa19.98■□□□□ 0.79
LMNA-205ENST00000368299 NOVP48745 357 aa19.98■□□□□ 0.79
LMNA-205ENST00000368299 OLFM4Q6UX06 510 aa19.98■□□□□ 0.79
LMNA-205ENST00000368299 CCDC148Q8NFR7 591 aa19.98■□□□□ 0.79
LMNA-205ENST00000368299 PLIN4Q96Q06 1357 aa19.98■□□□□ 0.79
LMNA-205ENST00000368299 A0A087WWV3 80 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 FAM205CA6NFA0 338 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 TOP1P11387 765 aaKnown RBP19.97■□□□□ 0.79
LMNA-205ENST00000368299 DOK7Q18PE1 504 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 MSL1Q68DK7 614 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 METTL16Q86W50 562 aaKnown RBP19.97■□□□□ 0.79
LMNA-205ENST00000368299 ZNF830Q96NB3 372 aaPredicted RBP19.97■□□□□ 0.79
LMNA-205ENST00000368299 BIN1O00499 593 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 SMARCA1P28370 1054 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 GRIN1Q05586 938 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 TEKT1Q969V4 418 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 SPZ1Q9BXG8 430 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 CSRNP2Q9H175 543 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 CLIP2Q9UDT6 1046 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 PCDHA4Q9UN74 947 aa19.97■□□□□ 0.79
LMNA-205ENST00000368299 F8W031 263 aaPredicted RBP19.96■□□□□ 0.79
LMNA-205ENST00000368299 DYNC1I1O14576 645 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 IKBKBO14920 756 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 PNOCQ13519 176 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 SPECC1Q5M775 1068 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 BLIDQ8IZY5 108 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 MYO3BQ8WXR4 1341 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 POLR2DO15514 142 aaKnown RBP19.96■□□□□ 0.79
LMNA-205ENST00000368299 PARP1P09874 1014 aaKnown RBP19.96■□□□□ 0.79
LMNA-205ENST00000368299 FKBP1AP62942 108 aaKnown RBP19.96■□□□□ 0.79
LMNA-205ENST00000368299 GABPAQ06546 454 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 MRIQ9BWK5 157 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 SWAP70Q9UH65 585 aa19.96■□□□□ 0.79
LMNA-205ENST00000368299 ATP2C1P98194 919 aaPredicted RBP19.95■□□□□ 0.78
LMNA-205ENST00000368299 MDM2Q00987 491 aaPredicted RBP19.95■□□□□ 0.78
LMNA-205ENST00000368299 PICALMQ13492 652 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 PIK3AP1Q6ZUJ8 805 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 DAGLBQ8NCG7 672 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 CEP95Q96GE4 821 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 USP40Q9NVE5 1235 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 KLRF2D3W0D1 207 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 POSTNQ15063 836 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 CNKSR1Q969H4 720 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 BARHL2Q9NY43 387 aa19.95■□□□□ 0.78
LMNA-205ENST00000368299 NOLC1Q14978 699 aaKnown RBP eCLIP19.94■□□□□ 0.78
LMNA-205ENST00000368299 CCDC12Q8WUD4 166 aaPredicted RBP19.94■□□□□ 0.78
LMNA-205ENST00000368299 MAP7D2Q96T17 732 aa19.94■□□□□ 0.78
LMNA-205ENST00000368299 PCDHA5Q9Y5H7 936 aa19.94■□□□□ 0.78
LMNA-205ENST00000368299 CYTH3O43739 400 aa19.93■□□□□ 0.78
LMNA-205ENST00000368299 VEGFAP15692 232 aaPredicted RBP19.93■□□□□ 0.78
LMNA-205ENST00000368299 ZNF174Q15697 407 aa19.93■□□□□ 0.78
LMNA-205ENST00000368299 SLC15A2Q16348 729 aa19.93■□□□□ 0.78
LMNA-205ENST00000368299 NT5DC1Q5TFE4 455 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms