RNA–Protein interactions for RNA: ENST00000367257.8

SYNE1-209, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5

Gene SYNE1, Length 5,022 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-209ENST00000367257 NUTM2BA6NNL0 878 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-209ENST00000367257 NUTM2EB1AL46 878 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-209ENST00000367257 LDHBP07195 334 aaKnown RBP9.86□□□□□ -0.83
SYNE1-209ENST00000367257 PDE4DQ08499 809 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 PLBD2Q8NHP8 589 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 PFDN4Q9NQP4 134 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 SBNO1A3KN83 1393 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 EYA2O00167 538 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 SGSM2O43147 1006 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 DNAJC8O75937 253 aaPredicted RBP9.86□□□□□ -0.83
SYNE1-209ENST00000367257 KARSQ15046 597 aaKnown RBP9.86□□□□□ -0.83
SYNE1-209ENST00000367257 HHATQ5VTY9 493 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 RNF10Q8N5U6 811 aaKnown RBP9.86□□□□□ -0.83
SYNE1-209ENST00000367257 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 FBXO18Q8NFZ0 1043 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 FAM135BQ49AJ0 1406 aa9.86□□□□□ -0.83
SYNE1-209ENST00000367257 TTC36A6NLP5 189 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 GIPC1O14908 333 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 STMN1P16949 149 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 GPTP24298 496 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 RPS6KA1Q15418 735 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 DIXDC1Q155Q3 683 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 ISM2Q6H9L7 571 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 RNF14Q9UBS8 474 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 YTHDC2Q9H6S0 1430 aaKnown RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 RPSAP08865 295 aaKnown RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 NONOQ15233 471 aaKnown RBP eCLIP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 PUM3Q15397 648 aaKnown RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 ZNF274Q96GC6 653 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 CAPZA3Q96KX2 299 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 PHF23Q9BUL5 403 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 CUEDC2Q9H467 287 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 HAUS4Q9H6D7 363 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 DONSONQ9NYP3 566 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 ZBTB7BO15156 539 aaPredicted RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 P4HA1P13674 534 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 PDE6BP35913 854 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 RAPGEF1Q13905 1077 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 EIF4A2Q14240 407 aaKnown RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 TADA2BQ86TJ2 420 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 VSIG1Q86XK7 387 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 FAM71BQ8TC56 605 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 TUBB6Q9BUF5 446 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 AGTPBP1Q9UPW5 1226 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 RNF123Q5XPI4 1314 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 ATP5J2-PTCD1G3V325 749 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 SLC27A2O14975 620 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 MAGEA1P43355 309 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 RBM6P78332 1123 aaKnown RBP9.85□□□□□ -0.83
SYNE1-209ENST00000367257 HSP90AA5PQ58FG0 334 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 TTC38Q5R3I4 469 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 MIER3Q7Z3K6 550 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 ARHGEF10LQ9HCE6 1279 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 SATB2Q9UPW6 733 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 CTNND2Q9UQB3 1225 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 HYOU1Q9Y4L1 999 aa9.85□□□□□ -0.83
SYNE1-209ENST00000367257 E7EVH7 732 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 CHUKO15111 745 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 PPFIA2O75334 1257 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 MCM7P33993 719 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 DYNC1I2Q13409 638 aaKnown RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 GKAP1Q5VSY0 366 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 SFMBT2Q5VUG0 894 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 CCDC125Q86Z20 511 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 HAUS1Q96CS2 278 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 CARD6Q9BX69 1037 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 TSPYL2Q9H2G4 693 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 SOS2Q07890 1332 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 ERBB4Q15303 1308 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 TLDC2A0PJX2 215 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 CCT6AP40227 531 aaKnown RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 NBPF14Q5TI25 921 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 DENND2CQ68D51 928 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 ADALQ6DHV7 355 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 USHBP1Q8N6Y0 703 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 BZW2Q9Y6E2 419 aaKnown RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 KNDC1Q76NI1 1749 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 ARHGEF10O15013 1369 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 KIF1BO60333 1816 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 STRN3Q13033 797 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 BRDTQ58F21 947 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 TRIM42Q8IWZ5 723 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 C8orf58Q8NAV2 365 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 DDX41Q9UJV9 622 aaKnown RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 CRCPO75575 148 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 MYL1P05976 194 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 LMNB2Q03252 620 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 TTLL12Q14166 644 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 POSTNQ15063 836 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 RASIP1Q5U651 963 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 METTL22Q9BUU2 404 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 CBX8Q9HC52 389 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 METTL14Q9HCE5 456 aaKnown RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 MCM9Q9NXL9 1143 aa9.84□□□□□ -0.83
SYNE1-209ENST00000367257 ZNF215Q9UL58 517 aaPredicted RBP9.84□□□□□ -0.83
SYNE1-209ENST00000367257 IL2RBP14784 551 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 MROH5Q6ZUA9 1318 aa9.83□□□□□ -0.84
SYNE1-209ENST00000367257 SDCCAG8Q86SQ7 713 aaPredicted RBP9.83□□□□□ -0.84
SYNE1-209ENST00000367257 KBTBD3Q8NAB2 608 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms