RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 A0A1W2PPC1 479 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 USP17L12C9JPN9 530 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 USP17L21D6R901 530 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 PRKAB2O43741 272 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 SMARCA5O60264 1052 aaPredicted RBP17.81■□□□□ 0.44
CTSD-202ENST00000367196 PTPREP23469 700 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 CDK8P49336 464 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 CACNB2Q08289 660 aaPredicted RBP17.81■□□□□ 0.44
CTSD-202ENST00000367196 GRB14Q14449 540 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 POTEEQ6S8J3 1075 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 C16orf86Q6ZW13 317 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 SLC44A5Q8NCS7 719 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 DYNLL2Q96FJ2 89 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 C11orf49Q9H6J7 331 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 TMX2Q9Y320 296 aa17.81■□□□□ 0.44
CTSD-202ENST00000367196 A0A1W2PRG0 241 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 STRNO43815 780 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 ZFYP08048 801 aaPredicted RBP17.8■□□□□ 0.44
CTSD-202ENST00000367196 HOXC6P09630 235 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 AKR1B1P15121 316 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 EVX2Q03828 476 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 SHCBP1Q8NEM2 672 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 DIS3LQ8TF46 1054 aaKnown RBP17.8■□□□□ 0.44
CTSD-202ENST00000367196 DCTPP1Q9H773 170 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 VCPKMTQ9H867 229 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 SLC5A4Q9NY91 659 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 BTBD7Q9P203 1132 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 RBM27Q9P2N5 1060 aaKnown RBP17.8■□□□□ 0.44
CTSD-202ENST00000367196 ALPK3Q96L96 1907 aa17.8■□□□□ 0.44
CTSD-202ENST00000367196 WDR46O15213 610 aaKnown RBP17.79■□□□□ 0.44
CTSD-202ENST00000367196 MSCO60682 206 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 FLOT1O75955 427 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 ATP2B2Q01814 1243 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 CCL14Q16627 93 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 GIMAP6Q6P9H5 292 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 KBTBD3Q8NAB2 608 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 SPATC1LQ9H0A9 340 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 PUS7LQ9H0K6 701 aaKnown RBP17.79■□□□□ 0.44
CTSD-202ENST00000367196 KANSL2Q9H9L4 492 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 GOPCQ9HD26 462 aa17.79■□□□□ 0.44
CTSD-202ENST00000367196 ERC2O15083 957 aa17.78■□□□□ 0.44
CTSD-202ENST00000367196 GNAT2P19087 354 aa17.78■□□□□ 0.44
CTSD-202ENST00000367196 SLFNL1Q499Z3 407 aa17.78■□□□□ 0.44
CTSD-202ENST00000367196 APPBP2Q92624 585 aa17.78■□□□□ 0.44
CTSD-202ENST00000367196 ZNF287Q9HBT7 754 aa17.78■□□□□ 0.44
CTSD-202ENST00000367196 FRMPD3Q5JV73 1810 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 RLFQ13129 1914 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 CCND3P30281 292 aaPredicted RBP17.77■□□□□ 0.44
CTSD-202ENST00000367196 DSG3P32926 999 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 CTR9Q6PD62 1173 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 DPP9Q86TI2 863 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 C7orf61Q8IZ16 206 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 MOV10L1Q9BXT6 1211 aaKnown RBP17.77■□□□□ 0.44
CTSD-202ENST00000367196 MROH8Q9H579 483 aa17.77■□□□□ 0.44
CTSD-202ENST00000367196 TTC41PQ6P2S7 1318 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 CYP2D7A0A087X1C5 515 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 RNF113AO15541 343 aaKnown RBP17.76■□□□□ 0.43
CTSD-202ENST00000367196 PLS1Q14651 629 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 ABRAQ8N0Z2 381 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 SPICE1Q8N0Z3 855 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 STRBPQ96SI9 672 aaKnown RBP17.76■□□□□ 0.43
CTSD-202ENST00000367196 PRO3102Q9H379 93 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 MKNK2Q9HBH9 465 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 PARP14Q460N5 1801 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 ROBO3Q96MS0 1386 aa17.76■□□□□ 0.43
CTSD-202ENST00000367196 RANBP2P49792 3224 aaKnown RBP17.76■□□□□ 0.43
CTSD-202ENST00000367196 SLC25A27O95847 323 aa17.75■□□□□ 0.43
CTSD-202ENST00000367196 EEF2P13639 858 aaKnown RBP17.75■□□□□ 0.43
CTSD-202ENST00000367196 ERCC3P19447 782 aa17.75■□□□□ 0.43
CTSD-202ENST00000367196 ADORA2AP29274 412 aa17.75■□□□□ 0.43
CTSD-202ENST00000367196 OLFML2BQ68BL8 750 aa17.75■□□□□ 0.43
CTSD-202ENST00000367196 CLEC10AQ8IUN9 316 aa17.75■□□□□ 0.43
CTSD-202ENST00000367196 ZBTB47Q9UFB7 747 aaPredicted RBP17.75■□□□□ 0.43
CTSD-202ENST00000367196 DDX20Q9UHI6 824 aaKnown RBP17.75■□□□□ 0.43
CTSD-202ENST00000367196 GPAA1O43292 621 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 CHGBP05060 677 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 CNGA1P29973 690 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 COPB2P35606 906 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 TDO2P48775 406 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 MNX1P50219 401 aaPredicted RBP17.74■□□□□ 0.43
CTSD-202ENST00000367196 LHX8Q68G74 356 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 NCAPG2Q86XI2 1143 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 SIAH1Q8IUQ4 282 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 ATG4CQ96DT6 458 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 NACAP1Q9BZK3 213 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 FLRT1Q9NZU1 646 aa17.74■□□□□ 0.43
CTSD-202ENST00000367196 GREB1LQ9C091 1923 aaPredicted RBP17.74■□□□□ 0.43
CTSD-202ENST00000367196 PFASO15067 1338 aa17.73■□□□□ 0.43
CTSD-202ENST00000367196 RAD21O60216 631 aa17.73■□□□□ 0.43
CTSD-202ENST00000367196 COL6A1P12109 1028 aa17.73■□□□□ 0.43
CTSD-202ENST00000367196 FCER1AP12319 257 aa17.73■□□□□ 0.43
CTSD-202ENST00000367196 KIAA1755Q5JYT7 1200 aa17.73■□□□□ 0.43
CTSD-202ENST00000367196 NPLOC4Q8TAT6 608 aa17.73■□□□□ 0.43
CTSD-202ENST00000367196 GSG1L2A8MUP6 293 aa17.72■□□□□ 0.43
CTSD-202ENST00000367196 MINDY4BA8MYZ0 360 aa17.72■□□□□ 0.43
CTSD-202ENST00000367196 APPP05067 770 aa17.72■□□□□ 0.43
CTSD-202ENST00000367196 TSHZ3Q63HK5 1081 aa17.72■□□□□ 0.43
CTSD-202ENST00000367196 SAMD1Q6SPF0 538 aaPredicted RBP17.72■□□□□ 0.43
CTSD-202ENST00000367196 OSBP2Q969R2 916 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 325.5 ms