RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 SV2BQ7L1I2 683 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 SGMS1Q86VZ5 419 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 STRBPQ96SI9 672 aaKnown RBP6□□□□□ -1.45
CDC42BPA-204ENST00000366767 EIF4ENIF1Q9NRA8 985 aaKnown RBP6□□□□□ -1.45
CDC42BPA-204ENST00000366767 PRPF3O43395 683 aaKnown RBP6□□□□□ -1.45
CDC42BPA-204ENST00000366767 GTPBP6O43824 516 aaPredicted RBP6□□□□□ -1.45
CDC42BPA-204ENST00000366767 UBXN1Q04323 297 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 PNOCQ13519 176 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 ATG9AQ7Z3C6 839 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 HEATR3Q7Z4Q2 680 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 PPP1R13BQ96KQ4 1090 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 CARD6Q9BX69 1037 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 EFCC1Q9HA90 598 aa6□□□□□ -1.45
CDC42BPA-204ENST00000366767 VWA3AA6NCI4 1184 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 TNIP1Q15025 636 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 RESP18Q5W5W9 173 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 TNKSO95271 1327 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ADAMTS2O95450 1211 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 NBPF14Q5TI25 921 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CRACR2BQ8N4Y2 399 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CEP120Q8N960 986 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 GBP1P32455 592 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PCK1P35558 622 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PHKA1P46020 1223 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC40Q4G0X9 1142 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 DNAJC21Q5F1R6 531 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ERMNQ8TAM6 284 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC42Q96M95 316 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 AK8Q96MA6 479 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZHX3Q9H4I2 956 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 SPATS2LQ9NUQ6 558 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 C17orf53Q8N3J3 647 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZSWIM5Q9P217 1185 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF609O15014 1411 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CPDO75976 1380 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 BTBD18B2RXH4 712 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ATP2B2Q01814 1243 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 WHAMMP3Q1A5X7 153 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 SLFNL1Q499Z3 407 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PARP1P09874 1014 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CHRNDQ07001 517 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 NONOQ15233 471 aaKnown RBP eCLIP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 RBBP5Q15291 538 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 TDRD12Q587J7 1177 aaKnown RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZSCAN29Q8IWY8 852 aaPredicted RBP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 TAOK3Q9H2K8 898 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 AATFQ9NY61 560 aaKnown RBP eCLIP5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 FAM184BQ9ULE4 1060 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PCDHA5Q9Y5H7 936 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 UBR1Q8IWV7 1749 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 TOM1O60784 492 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 STX17P56962 302 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CLEC4GQ6UXB4 293 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PIK3AP1Q6ZUJ8 805 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC65Q8IXS2 484 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 AGXT2Q9BYV1 514 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 TMOD2Q9NZR1 351 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 NRBP1Q9UHY1 535 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 KCNJ14Q9UNX9 436 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PPP2R2CQ9Y2T4 447 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PNPLA7Q6ZV29 1317 aa5.99□□□□□ -1.45
CDC42BPA-204ENST00000366767 PTPREP23469 700 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 DNM2P50570 870 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CCDC155Q8N6L0 562 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 PPFIBP2Q8ND30 876 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 LMBR1Q8WVP7 490 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 KAZALD1Q96I82 304 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 BRIP1Q9BX63 1249 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 VCXQ9H320 206 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 FANCLQ9NW38 375 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 MKRN1Q9UHC7 482 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 MRPL12P52815 198 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 VWA3BQ502W6 1294 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 CEP128Q6ZU80 1094 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 VSTM4Q8IW00 320 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 TBC1D22AQ8WUA7 517 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 JADE2Q9NQC1 790 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 hCG_1984214I3L0E3 225 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 AKR1B10O60218 316 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZEB2O60315 1214 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 SLFN14P0C7P3 912 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 MATR3P43243 847 aaKnown RBP eCLIP5.98□□□□□ -1.455e-7■■■□□ 18.6
CDC42BPA-204ENST00000366767 ASIC1P78348 528 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 DPCR1Q3MIW9 517 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ZNF713Q8N859 430 aaPredicted RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 IL25Q9H293 177 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 PHACTR2O75167 634 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 SCG2P13521 617 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 PDE4DQ08499 809 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ARL6IP4Q66PJ3 421 aaKnown RBP5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ACSBG1Q96GR2 724 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 SELENOOQ9BVL4 669 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 TSKSQ9UJT2 592 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 MAN1B1Q9UKM7 699 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ASAP1Q9ULH1 1129 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 GNA14O95837 355 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ADRA2BP18089 450 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 ARHGAP25P42331 645 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 DNA2P51530 1060 aa5.98□□□□□ -1.45
CDC42BPA-204ENST00000366767 RPS8P62241 208 aaKnown RBP5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms