RNA–Protein interactions for RNA: ENST00000366744.5

MRPL55-216, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-216ENST00000366744 ZMYM6O95789 1325 aa11.08□□□□□ -0.64
MRPL55-216ENST00000366744 PLIN4Q96Q06 1357 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 WDR46O15213 610 aaKnown RBP11.07□□□□□ -0.64
MRPL55-216ENST00000366744 RASA1P20936 1047 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 MAPK4P31152 587 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 GUCY1A2P33402 732 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 CLEC10AQ8IUN9 316 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 SLAIN1Q8ND83 568 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 SOCS4Q8WXH5 440 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 FAM227BQ96M60 508 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 MORF4L1Q9UBU8 362 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 ISY1Q9ULR0 285 aaKnown RBP11.07□□□□□ -0.64
MRPL55-216ENST00000366744 MYH6P13533 1939 aa11.07□□□□□ -0.64
MRPL55-216ENST00000366744 ZNFX1Q9P2E3 1918 aaKnown RBP11.06□□□□□ -0.64
MRPL55-216ENST00000366744 TSPY2A6NKD2 308 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 PRDM1O75626 825 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 FLOT1O75955 427 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
MRPL55-216ENST00000366744 SDSP20132 328 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 GRK4P32298 578 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 ERVK-9P63128 1117 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 ERVK-24P63145 666 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 UBXN2AP68543 259 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 MLLT1Q03111 559 aaPredicted RBP11.06□□□□□ -0.64
MRPL55-216ENST00000366744 PRKCZQ05513 592 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 TTC22Q5TAA0 569 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 WDR78Q5VTH9 848 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
MRPL55-216ENST00000366744 CWC27Q6UX04 472 aaKnown RBP11.06□□□□□ -0.64
MRPL55-216ENST00000366744 SPICE1Q8N0Z3 855 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 RUFY2Q8WXA3 655 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 ARMC5Q96C12 935 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 VCPKMTQ9H867 229 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 TMX2Q9Y320 296 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 IVNS1ABPQ9Y6Y0 642 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 RAD50Q92878 1312 aa11.06□□□□□ -0.64
MRPL55-216ENST00000366744 FRMPD3Q5JV73 1810 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 RANBP6O60518 1105 aaKnown RBP11.05□□□□□ -0.64
MRPL55-216ENST00000366744 TTLL1O95922 423 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 CATSPERGQ6ZRH7 1159 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 CENPQQ7L2Z9 268 aaPredicted RBP11.05□□□□□ -0.64
MRPL55-216ENST00000366744 MB21D1Q8N884 522 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 SH3TC2Q8TF17 1288 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 P2RX7Q99572 595 aaKnown RBP11.05□□□□□ -0.64
MRPL55-216ENST00000366744 RNF41Q9H4P4 317 aaPredicted RBP11.05□□□□□ -0.64
MRPL55-216ENST00000366744 HOXC10Q9NYD6 342 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 SYNPO2Q9UMS6 1093 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 RABGAP1Q9Y3P9 1069 aa11.05□□□□□ -0.64
MRPL55-216ENST00000366744 CTDP1Q9Y5B0 961 aaPredicted RBP11.05□□□□□ -0.64
MRPL55-216ENST00000366744 A0A1W2PRG0 241 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 ADCY3O60266 1144 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 CENPBP07199 599 aaPredicted RBP11.04□□□□□ -0.64
MRPL55-216ENST00000366744 PCP11498 1178 aaKnown RBP11.04□□□□□ -0.64
MRPL55-216ENST00000366744 FLT3LGP49771 235 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 COG2Q14746 738 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 VPS53Q5VIR6 699 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 ZNF333Q96JL9 665 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 NUDT12Q9BQG2 462 aa11.04□□□□□ -0.64
MRPL55-216ENST00000366744 SPDYE16A6NNV3 312 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-216ENST00000366744 SMIM22K7EJ46 135 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 MYCP01106 439 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-216ENST00000366744 HSPD1P10809 573 aaKnown RBP11.03□□□□□ -0.64
MRPL55-216ENST00000366744 CTGFP29279 349 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 CAP1Q01518 475 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 TFAP4Q01664 338 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 CTDSPL2Q05D32 466 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 IKQ13123 557 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-216ENST00000366744 IRF5Q13568 498 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 PLS1Q14651 629 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 ALX1Q15699 326 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 RRP12Q5JTH9 1297 aaKnown RBP11.03□□□□□ -0.64
MRPL55-216ENST00000366744 LBX2Q6XYB7 198 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
MRPL55-216ENST00000366744 CCDC136Q96JN2 1154 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 NYAP2Q9P242 653 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 CLIP2Q9UDT6 1046 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 CTNNA3Q9UI47 895 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 ANAPC4Q9UJX5 808 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 STX8Q9UNK0 236 aa11.03□□□□□ -0.64
MRPL55-216ENST00000366744 ZNF213O14771 459 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 ORC4O43929 436 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 HMGCRP04035 888 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 PDE4AP27815 886 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 COPB2P35606 906 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 RGS2P41220 211 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 NT5C2P49902 561 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 HAND2P61296 217 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 IMMTQ16891 758 aaKnown RBP11.02□□□□□ -0.65
MRPL55-216ENST00000366744 FAM47AQ5JRC9 791 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 FAM83BQ5T0W9 1011 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 MFSD6Q6ZSS7 791 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 PLEKHH3Q7Z736 793 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 TRMT44Q8IYL2 757 aaKnown RBP11.02□□□□□ -0.65
MRPL55-216ENST00000366744 LRRC47Q8N1G4 583 aaKnown RBP11.02□□□□□ -0.65
MRPL55-216ENST00000366744 NEDD1Q8NHV4 660 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 NKX2-3Q8TAU0 364 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 PXYLP1Q8TE99 480 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 CEP95Q96GE4 821 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 APBA2Q99767 749 aa11.02□□□□□ -0.65
MRPL55-216ENST00000366744 TXNRD2Q9NNW7 524 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms