RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 ERVK-24P63145 666 aa16.3■□□□□ 0.2
MRPL55-205ENST00000366731 PPARAQ07869 468 aa16.3■□□□□ 0.2
MRPL55-205ENST00000366731 MTFR1Q15390 333 aa16.3■□□□□ 0.2
MRPL55-205ENST00000366731 MCMDC2Q4G0Z9 681 aa16.3■□□□□ 0.2
MRPL55-205ENST00000366731 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
MRPL55-205ENST00000366731 SDSP20132 328 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 PDE4AP27815 886 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 CTDSPL2Q05D32 466 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 FAM47AQ5JRC9 791 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 WDR78Q5VTH9 848 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 PORCNQ9H237 461 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 OSBPL3Q9H4L5 887 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 SH2D4AQ9H788 454 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 VCPKMTQ9H867 229 aa16.29■□□□□ 0.2
MRPL55-205ENST00000366731 CWC22Q9HCG8 908 aaKnown RBP16.29■□□□□ 0.2
MRPL55-205ENST00000366731 CNMDO75829 334 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 SLC3A2P08195 630 aaKnown RBP16.28■□□□□ 0.2
MRPL55-205ENST00000366731 COG2Q14746 738 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 ZNF589Q86UQ0 364 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-205ENST00000366731 GTF3C2Q8WUA4 911 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-205ENST00000366731 ZNF287Q9HBT7 754 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 BTBD7Q9P203 1132 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 CLIP2Q9UDT6 1046 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 ROBO3Q96MS0 1386 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 SPDYE16A6NNV3 312 aaPredicted RBP16.28■□□□□ 0.2
MRPL55-205ENST00000366731 FLOT1O75955 427 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 PDE4BQ07343 736 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 SLAIN1Q8ND83 568 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 GJD2Q9UKL4 321 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 RABGAP1Q9Y3P9 1069 aa16.28■□□□□ 0.2
MRPL55-205ENST00000366731 TSPY3P0CV98 308 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 TSPY8P0CW00 308 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 CCL5P13501 91 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 CYP2B6P20813 491 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 UBXN2AP68543 259 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 TFAP4Q01664 338 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 CWC27Q6UX04 472 aaKnown RBP16.27■□□□□ 0.19
MRPL55-205ENST00000366731 LPAR1Q92633 364 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 CHMP4CQ96CF2 233 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 GOPCQ9HD26 462 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 DIAPH3Q9NSV4 1193 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 HOXC10Q9NYD6 342 aa16.27■□□□□ 0.19
MRPL55-205ENST00000366731 FGAP02671 866 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 INHAP05111 366 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 HSPD1P10809 573 aaKnown RBP16.26■□□□□ 0.19
MRPL55-205ENST00000366731 MAPK4P31152 587 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 IRF5Q13568 498 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 PLS1Q14651 629 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 FAM83BQ5T0W9 1011 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 GPR142Q7Z601 462 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 ATG4CQ96DT6 458 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 CEP95Q96GE4 821 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 NUP88Q99567 741 aaPredicted RBP16.26■□□□□ 0.19
MRPL55-205ENST00000366731 RNF208Q9H0X6 261 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 FBXO28Q9NVF7 368 aa16.26■□□□□ 0.19
MRPL55-205ENST00000366731 WDR46O15213 610 aaKnown RBP16.25■□□□□ 0.19
MRPL55-205ENST00000366731 DSG3P32926 999 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 HAND2P61296 217 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 CCNA1P78396 465 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 PLEKHH3Q7Z736 793 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 NUDT12Q9BQG2 462 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 UNC93B1Q9H1C4 597 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 TOMM22Q9NS69 142 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 NYAP2Q9P242 653 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 TACC3Q9Y6A5 838 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
MRPL55-205ENST00000366731 IGKV6D-41A0A0C4DH26 115 aa16.24■□□□□ 0.19
MRPL55-205ENST00000366731 TRIM32Q13049 653 aa16.24■□□□□ 0.19
MRPL55-205ENST00000366731 ALX1Q15699 326 aa16.24■□□□□ 0.19
MRPL55-205ENST00000366731 RRP12Q5JTH9 1297 aaKnown RBP16.24■□□□□ 0.19
MRPL55-205ENST00000366731 LBX2Q6XYB7 198 aa16.24■□□□□ 0.19
MRPL55-205ENST00000366731 LRRC47Q8N1G4 583 aaKnown RBP16.24■□□□□ 0.19
MRPL55-205ENST00000366731 PXYLP1Q8TE99 480 aa16.24■□□□□ 0.19
MRPL55-205ENST00000366731 MTMR4Q9NYA4 1195 aa16.24■□□□□ 0.19
MRPL55-205ENST00000366731 TSPY2A6NKD2 308 aa16.23■□□□□ 0.19
MRPL55-205ENST00000366731 F5H6K3 240 aa16.23■□□□□ 0.19
MRPL55-205ENST00000366731 RANBP6O60518 1105 aaKnown RBP16.23■□□□□ 0.19
MRPL55-205ENST00000366731 NDUFB10O96000 172 aa16.23■□□□□ 0.19
MRPL55-205ENST00000366731 GSPT1P15170 499 aaKnown RBP16.23■□□□□ 0.19
MRPL55-205ENST00000366731 KLRC3Q07444 240 aa16.23■□□□□ 0.19
MRPL55-205ENST00000366731 NEDD1Q8NHV4 660 aa16.23■□□□□ 0.19
MRPL55-205ENST00000366731 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
MRPL55-205ENST00000366731 NMT2O60551 498 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 TTLL1O95922 423 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 MFAP1P55081 439 aaKnown RBP16.22■□□□□ 0.19
MRPL55-205ENST00000366731 TTC22Q5TAA0 569 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 TICAM2Q86XR7 235 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 SOCS4Q8WXH5 440 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 MOV10L1Q9BXT6 1211 aaKnown RBP16.22■□□□□ 0.19
MRPL55-205ENST00000366731 SPATC1LQ9H0A9 340 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.22■□□□□ 0.19
MRPL55-205ENST00000366731 HTTP42858 3142 aa16.22■□□□□ 0.19
MRPL55-205ENST00000366731 HIP1O00291 1037 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 CCL14Q16627 93 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 MORN1Q5T089 497 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 NCAPG2Q86XI2 1143 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 TRIB2Q92519 343 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 ANAPC4Q9UJX5 808 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 MTMR7Q9Y216 660 aa16.21■□□□□ 0.19
MRPL55-205ENST00000366731 IVNS1ABPQ9Y6Y0 642 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms