RNA–Protein interactions for RNA: ENST00000366666.6

CAPN9-203, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,173 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-203ENST00000366666 SMARCC2Q8TAQ2 1214 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 PITPNM2Q9BZ72 1349 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 NID2Q14112 1375 aa14.24□□□□□ -0.13
CAPN9-203ENST00000366666 GOLGA6L22H0YM25 854 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 CAP2P40123 477 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 FMR1Q06787 632 aaKnown RBP eCLIP14.23□□□□□ -0.13
CAPN9-203ENST00000366666 RTN1Q16799 776 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 SYNE3Q6ZMZ3 975 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 NBPF11Q86T75 865 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 GLIS2Q9BZE0 524 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-203ENST00000366666 CPVLQ9H3G5 476 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 NMRK2Q9NPI5 230 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 ZDHHC9Q9Y397 364 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 A0A1W2PRG0 241 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 IQCA1LA6NCM1 817 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 ESPNB1AK53 854 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 TTLL1O95922 423 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 GOLGA8HP0CJ92 632 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 NT5C2P49902 561 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 FOSBP53539 338 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 FOXD4L5Q5VV16 416 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-203ENST00000366666 TMEM179Q6ZVK1 233 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 USP48Q86UV5 1035 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 FOXD4L4Q8WXT5 416 aaPredicted RBP14.23□□□□□ -0.13
CAPN9-203ENST00000366666 GJB4Q9NTQ9 266 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 TAOK2Q9UL54 1235 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 ZBTB21Q9ULJ3 1066 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 OTOFQ9HC10 1997 aa14.23□□□□□ -0.13
CAPN9-203ENST00000366666 DOCK1Q14185 1865 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 hCG_1642624A0A1W2PR95 340 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 TOP1P11387 765 aaKnown RBP14.22□□□□□ -0.13
CAPN9-203ENST00000366666 ECE1P42892 770 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 ICA1Q05084 483 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 SLC35G1Q2M3R5 365 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 USP17L2Q6R6M4 530 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 SULF1Q8IWU6 871 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 ZKSCAN4Q969J2 545 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-203ENST00000366666 AIFM3Q96NN9 605 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 USP17L5A8MUK1 530 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 CPLX1O14810 134 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 DDAH1O94760 285 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 FUT2Q10981 343 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 MAP1SQ66K74 1059 aaPredicted RBP14.22□□□□□ -0.13
CAPN9-203ENST00000366666 ACER1Q8TDN7 264 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 KANSL2Q9H9L4 492 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 CWC22Q9HCG8 908 aaKnown RBP14.22□□□□□ -0.13
CAPN9-203ENST00000366666 MAD2L2Q9UI95 211 aa14.22□□□□□ -0.13
CAPN9-203ENST00000366666 SYT1P21579 422 aa14.21□□□□□ -0.13
CAPN9-203ENST00000366666 CCDC178Q5BJE1 867 aa14.21□□□□□ -0.13
CAPN9-203ENST00000366666 KIAA1755Q5JYT7 1200 aa14.21□□□□□ -0.13
CAPN9-203ENST00000366666 SRBD1Q8N5C6 995 aaKnown RBP14.21□□□□□ -0.13
CAPN9-203ENST00000366666 TRIM44Q96DX7 344 aaPredicted RBP14.21□□□□□ -0.13
CAPN9-203ENST00000366666 CHAMP1Q96JM3 812 aa14.21□□□□□ -0.13
CAPN9-203ENST00000366666 LLPHQ9BRT6 129 aaKnown RBP14.21□□□□□ -0.13
CAPN9-203ENST00000366666 CABP5Q9NP86 173 aa14.21□□□□□ -0.13
CAPN9-203ENST00000366666 PAPPA2Q9BXP8 1791 aa14.21□□□□□ -0.14
CAPN9-203ENST00000366666 PDHBP11177 359 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 MOB2Q70IA6 237 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 ZC3H15Q8WU90 426 aaKnown RBP14.2□□□□□ -0.14
CAPN9-203ENST00000366666 WRNIP1Q96S55 665 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 CLEC11AQ9Y240 323 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 PPP2R3BQ9Y5P8 575 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 FRMPD2Q68DX3 1309 aaPredicted RBP14.2□□□□□ -0.14
CAPN9-203ENST00000366666 PHIPQ8WWQ0 1821 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 TRAF5O00463 557 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 RAD21O60216 631 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 TPM2P07951 284 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 VEGFAP15692 232 aaPredicted RBP14.2□□□□□ -0.14
CAPN9-203ENST00000366666 RCAN1P53805 252 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 GRM4Q14833 912 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 PIBF1Q8WXW3 757 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 NYAP2Q9P242 653 aa14.2□□□□□ -0.14
CAPN9-203ENST00000366666 DHX16O60231 1041 aaKnown RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 USP2O75604 605 aaPredicted RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 IFNAR1P17181 557 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 DGKZQ13574 1117 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 OTUD7BQ6GQQ9 843 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 TMTC3Q6ZXV5 915 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 PNMA8AQ86V59 439 aaPredicted RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 GAS2L3Q86XJ1 694 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 CTCFLQ8NI51 663 aaPredicted RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 MKL1Q969V6 931 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 KLRG1Q96E93 195 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 CDCA5Q96FF9 252 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 SLC26A6Q9BXS9 759 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 ORC3Q9UBD5 711 aaPredicted RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 ZNF112Q9UJU3 913 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 PALM3A6NDB9 673 aaPredicted RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 CYTH3O43739 400 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 CALM1P0DP23 149 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 CALM2P0DP24 149 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 CALM3P0DP25 149 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 GUCY1B3Q02153 619 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 ZYXQ15942 572 aaKnown RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 LARP1BQ659C4 914 aaKnown RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 NUP88Q99567 741 aaPredicted RBP14.19□□□□□ -0.14
CAPN9-203ENST00000366666 ZNF341Q9BYN7 854 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 PDCL3Q9H2J4 239 aa14.19□□□□□ -0.14
CAPN9-203ENST00000366666 TCHHQ07283 1943 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms