RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 DNM2P50570 870 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 CSRNP1Q96S65 589 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 EIF3CQ99613 913 aaKnown RBP18.4■□□□□ 0.54
NID1-202ENST00000366595 MRPL46Q9H2W6 279 aaKnown RBP18.4■□□□□ 0.54
NID1-202ENST00000366595 KCNK3O14649 394 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 MBD4O95243 580 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 ANXA1P04083 346 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 C2CD5Q86YS7 1000 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 TRIML1Q8N9V2 468 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 RABGGTAQ92696 567 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 NACA2Q9H009 215 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 FAM8A1Q9UBU6 413 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 MAPK8IP1Q9UQF2 711 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 A0A087WUV0 522 aaPredicted RBP18.4■□□□□ 0.54
NID1-202ENST00000366595 SLC27A2O14975 620 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 RXRAP19793 462 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 PDCD7Q8N8D1 485 aaKnown RBP18.4■□□□□ 0.54
NID1-202ENST00000366595 IPO11Q9UI26 975 aaKnown RBP18.4■□□□□ 0.54
NID1-202ENST00000366595 TFCP2Q12800 502 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 TPTE2Q6XPS3 522 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 MYCT1Q8N699 235 aa18.4■□□□□ 0.54
NID1-202ENST00000366595 ACTR5Q9H9F9 607 aaPredicted RBP18.4■□□□□ 0.54
NID1-202ENST00000366595 ATF2P15336 505 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 STX1BP61266 288 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 LONRF3Q496Y0 759 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 MCTP2Q6DN12 878 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 CCDC68Q9H2F9 335 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 ZBTB40Q9NUA8 1239 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 CDR2Q01850 454 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 LRRC43Q8N309 656 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 U2AF1L4Q8WU68 220 aaKnown RBP18.39■□□□□ 0.53
NID1-202ENST00000366595 ZC3H15Q8WU90 426 aaKnown RBP18.39■□□□□ 0.53
NID1-202ENST00000366595 PA2G4Q9UQ80 394 aaKnown RBP18.39■□□□□ 0.53
NID1-202ENST00000366595 SP4Q02446 784 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 DEUP1Q05D60 604 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 CABP7Q86V35 215 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 XPO4Q9C0E2 1151 aaKnown RBP18.39■□□□□ 0.53
NID1-202ENST00000366595 NIP7Q9Y221 180 aaKnown RBP eCLIP18.39■□□□□ 0.533e-6■■■■■ 33.7
NID1-202ENST00000366595 NCAPH2Q6IBW4 605 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 HACE1Q8IYU2 909 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 CCDC138Q96M89 665 aa18.39■□□□□ 0.53
NID1-202ENST00000366595 ATP1A2P50993 1020 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 KRT81Q14533 505 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 FOXO3O43524 673 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 PRPF6O94906 941 aaKnown RBP18.38■□□□□ 0.53
NID1-202ENST00000366595 IFNB1P01574 187 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 TRIM50Q86XT4 487 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 SCYL1Q96KG9 808 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 INTS9Q9NV88 658 aaKnown RBP18.38■□□□□ 0.53
NID1-202ENST00000366595 V9GY48 417 aaPredicted RBP18.38■□□□□ 0.53
NID1-202ENST00000366595 CHMP2AO43633 222 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 GCNT3O95395 438 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 LMNB1P20700 586 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 MRPL44Q9H9J2 332 aaKnown RBP18.38■□□□□ 0.53
NID1-202ENST00000366595 TMTC3Q6ZXV5 915 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 PACSIN2Q9UNF0 486 aaPredicted RBP18.38■□□□□ 0.53
NID1-202ENST00000366595 PPP2R2CQ9Y2T4 447 aa18.38■□□□□ 0.53
NID1-202ENST00000366595 XRCC5P13010 732 aaKnown RBP18.37■□□□□ 0.53
NID1-202ENST00000366595 ZCRB1Q8TBF4 217 aaKnown RBP18.37■□□□□ 0.53
NID1-202ENST00000366595 MRFAP1L1Q96HT8 127 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 TXLNGQ9NUQ3 528 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 CALCRLQ16602 461 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 APPBP2Q92624 585 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 LSM14BQ9BX40 385 aaKnown RBP18.37■□□□□ 0.53
NID1-202ENST00000366595 FAM207AQ9NSI2 230 aaPredicted RBP18.37■□□□□ 0.53
NID1-202ENST00000366595 WDR70Q9NW82 654 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 ANGPTL2Q9UKU9 493 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 MAST3O60307 1309 aa18.37■□□□□ 0.53
NID1-202ENST00000366595 SLMAPQ14BN4 828 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 KLHDC4Q8TBB5 520 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 RRP15Q9Y3B9 282 aaKnown RBP18.36■□□□□ 0.53
NID1-202ENST00000366595 AQRO60306 1485 aaKnown RBP eCLIP18.36■□□□□ 0.539e-7■■■■□ 21
NID1-202ENST00000366595 B4E1Z4 1266 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 H0YCG3 227 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 IRS4O14654 1257 aaPredicted RBP18.36■□□□□ 0.53
NID1-202ENST00000366595 KMT5BQ4FZB7 885 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 TEX11Q8IYF3 940 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 AZI2Q9H6S1 392 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 CNOT10Q9H9A5 744 aaKnown RBP18.36■□□□□ 0.53
NID1-202ENST00000366595 TPCN1Q9ULQ1 816 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 PCDHB13Q9Y5F0 798 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 CD2APQ9Y5K6 639 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 CCT5P48643 541 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 BSPRYQ5W0U4 402 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 RAB44Q7Z6P3 723 aaPredicted RBP18.36■□□□□ 0.53
NID1-202ENST00000366595 C8orf58Q8NAV2 365 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 HDAC11Q96DB2 347 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 STAM2O75886 525 aa18.36■□□□□ 0.53
NID1-202ENST00000366595 C17orf53Q8N3J3 647 aaPredicted RBP18.36■□□□□ 0.53
NID1-202ENST00000366595 KCNJ18B7U540 433 aa18.35■□□□□ 0.53
NID1-202ENST00000366595 POLR2BP30876 1174 aaKnown RBP18.35■□□□□ 0.53
NID1-202ENST00000366595 KCNJ12Q14500 433 aa18.35■□□□□ 0.53
NID1-202ENST00000366595 KRT40Q6A162 431 aa18.35■□□□□ 0.53
NID1-202ENST00000366595 ADALQ6DHV7 355 aa18.35■□□□□ 0.53
NID1-202ENST00000366595 ANKRD35Q8N283 1001 aa18.35■□□□□ 0.53
NID1-202ENST00000366595 NOP56O00567 594 aaKnown RBP18.35■□□□□ 0.53
NID1-202ENST00000366595 S100BP04271 92 aaPredicted RBP18.35■□□□□ 0.53
NID1-202ENST00000366595 METTL14Q9HCE5 456 aaKnown RBP18.35■□□□□ 0.53
NID1-202ENST00000366595 GPCPD1Q9NPB8 672 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms