RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SLITRK5O94991 958 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 ETV3P41162 512 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 GRIA4P48058 902 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 LIMS1P48059 325 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 PTPN12Q05209 780 aaKnown RBP1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 PPP2R3AQ06190 1150 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 TNK2Q07912 1038 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 FKBP5Q13451 457 aaPredicted RBP1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 LAPTM5Q13571 262 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 GAB4Q2WGN9 574 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 RPS26P11Q5JNZ5 115 aaPredicted RBP1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 PEAR1Q5VY43 1037 aaPredicted RBP1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 PLEKHH3Q7Z736 793 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 SPATA3Q8NHX4 192 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF507Q8TCN5 953 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 FNIP1Q8TF40 1166 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 KCNB2Q92953 911 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 CSRNP2Q9H175 543 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 LATS2Q9NRM7 1088 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 NTMQ9P121 344 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 TESMINQ9Y4I5 508 aa1.12□□□□□ -2.23
RNU6-54P-201ENST00000365563 TNFRSF21O75509 655 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 HOXB6P17509 224 aaKnown RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 ITPKAP23677 461 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 IGFBP6P24592 240 aaPredicted RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 KIR2DL1P43626 348 aaPredicted RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 KIR2DL2P43627 348 aaPredicted RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 SARSP49591 514 aaKnown RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 GALK1P51570 392 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 NCKAP1LP55160 1127 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 DNM1Q05193 864 aaKnown RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 FOXE3Q13461 319 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 RAB3GAP1Q15042 981 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 SPRED3Q2MJR0 410 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 HS1BP3Q53T59 392 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 FAM26DQ5JW98 314 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 MIIPQ5JXC2 388 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 SPDYAQ5MJ70 313 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZBTB37Q5TC79 503 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 LETMD1Q6P1Q0 360 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF585AQ6P3V2 769 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZC3H14Q6PJT7 736 aaKnown RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 MPRIPQ6WCQ1 1025 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 MICALCLQ6ZW33 695 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 MRGPRGQ86SM5 289 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 TSPYL5Q86VY4 417 aaPredicted RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 CIR1Q86X95 450 aaPredicted RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 ADGRG2Q8IZP9 1017 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 VSIG10Q8N0Z9 540 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 EDEM1Q92611 657 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 EMILIN2Q9BXX0 1053 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 PDGFDQ9GZP0 370 aaPredicted RBP1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 PRDM14Q9GZV8 571 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 SAP130Q9H0E3 1048 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 RNF38Q9H0F5 515 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 KCNH3Q9ULD8 1083 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 PCDHA11Q9Y5I1 949 aa1.11□□□□□ -2.23
RNU6-54P-201ENST00000365563 NPEPPSL1A6NEC2 478 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 INO80B-WBP1J3KQ70 363 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 LAMTOR5O43504 91 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP2O75604 605 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 PDGFAP04085 211 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 ADH4P08319 380 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 MZF1P28698 734 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 CAP2P40123 477 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 USP5P45974 858 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 HTRA3P83110 453 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 FOXO4P98177 505 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 ICAM4Q14773 271 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 NR1I3Q14994 352 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 PPM1JQ5JR12 505 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 GALNT18Q6P9A2 607 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 RNF207Q6ZRF8 634 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 TTLL7Q6ZT98 887 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 CEP128Q6ZU80 1094 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 LIMS2Q7Z4I7 341 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 GRASPQ7Z6J2 395 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF761Q86XN6 746 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 FAM200AQ8TCP9 573 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZNF526Q8TF50 670 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 NEU4Q8WWR8 484 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 LINC01599Q8WXQ3 324 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 EAF1Q96JC9 268 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 UCN2Q96RP3 112 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 TCF12Q99081 682 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 KRTAP1-5Q9BYS1 174 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 GPR62Q9BZJ7 368 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 INO80BQ9C086 356 aaPredicted RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 CD248Q9HCU0 757 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 ADARB2Q9NS39 739 aaKnown RBP1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 KLHL14Q9P2G3 628 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZMYM5Q9UJ78 669 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 INVSQ9Y283 1065 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 TAF6LQ9Y6J9 622 aa1.1□□□□□ -2.23
RNU6-54P-201ENST00000365563 NUDT19A8MXV4 375 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 ZBTB39O15060 712 aa1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 PLA2G1BP04054 148 aaKnown RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 POU3F3P20264 500 aaPredicted RBP1.09□□□□□ -2.23
RNU6-54P-201ENST00000365563 SDHBP21912 280 aa1.09□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms