RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 TMEM201Q5SNT2 666 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 TCERG1LQ5VWI1 586 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 ZNF605Q86T29 641 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 SLFN12Q8IYM2 578 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 DTWD2Q8NBA8 298 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 DNAJB8Q8NHS0 232 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 BAHD1Q8TBE0 780 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 CCDC74BQ96LY2 380 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 DPH2Q9BQC3 489 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 RNF32Q9H0A6 362 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 DUSP15Q9H1R2 295 aaPredicted RBP3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 ADAMTS10Q9H324 1103 aa3.41□□□□□ -1.86
RNU6-1048P-201ENST00000364054 OR14I1A6ND48 311 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ABLIM1O14639 778 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ZGLP1P0C6A0 271 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 DLG4P78352 724 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 XPCQ01831 940 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RAD51AP2Q09MP3 1159 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 TMEM62Q0P6H9 643 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PSMD2Q13200 908 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 MAP3K11Q16584 847 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RNF111Q6ZNA4 994 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RELL1Q8IUW5 271 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PPP1R13LQ8WUF5 828 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 JARID2Q92833 1246 aaPredicted RBP3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RELTQ969Z4 430 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 BORCS6Q96GS4 357 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 INTS4Q96HW7 963 aaKnown RBP3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CNOT6Q9ULM6 557 aaKnown RBP3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 YBX2Q9Y2T7 364 aaKnown RBP3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PCDHB5Q9Y5E4 795 aa3.4□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SUPT5HO00267 1087 aaKnown RBP3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SASH1O94885 1247 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 KRT1P04264 644 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 HOXA5P20719 270 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 GBP1P32455 592 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RBM10P98175 930 aaKnown RBP3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 LMNB2Q03252 620 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SLC14A2Q15849 920 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PHACTR4Q8IZ21 702 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 GATAD2BQ8WXI9 593 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ACSF2Q96CM8 615 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 Q96M66 194 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SETDB2Q96T68 719 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 DUSP9Q99956 384 aaKnown RBP3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 C19orf44Q9H6X5 657 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ZNF552Q9H707 407 aaPredicted RBP3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 MRS2Q9HD23 443 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PARD6AQ9NPB6 346 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CRTAC1Q9NQ79 661 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 GPR160Q9UJ42 338 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CNTNAP4Q9C0A0 1308 aa3.39□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RBM47A0AV96 593 aaKnown RBP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CILPO75339 1184 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 TFE3P19532 575 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ARL4AP40617 200 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 KIR2DL1P43626 348 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 KIR2DL2P43627 348 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PCBP3P57721 371 aaKnown RBP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ZNF655Q8N720 491 aaPredicted RBP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PHC3Q8NDX5 983 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 KREMEN1Q96MU8 473 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SIRT5Q9NXA8 310 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ZMYM5Q9UJ78 669 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PCDHA11Q9Y5I1 949 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 PRR36Q9H6K5 1346 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ROBO2Q9HCK4 1378 aa3.38□□□□□ -1.87
RNU6-1048P-201ENST00000364054 WASH4PA8MWX3 477 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SYN1P17600 705 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ERCC3P19447 782 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CDK8P49336 464 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CAMK2GQ13555 558 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 MPP2Q14168 576 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 NFIXQ14938 502 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CWF19L2Q2TBE0 894 aaKnown RBP3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SNAP47Q5SQN1 464 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 AEBP1Q8IUX7 1158 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 DAGLBQ8NCG7 672 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SYTL5Q8TDW5 730 aaPredicted RBP3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CRELD1Q96HD1 420 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 KRTAP4-5Q9BYR2 181 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 MCOLN1Q9GZU1 580 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 KCTD3Q9Y597 815 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 IRAK3Q9Y616 596 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 USP31Q70CQ4 1352 aa3.37□□□□□ -1.87
RNU6-1048P-201ENST00000364054 ANKRD33BA6NCL7 494 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SORBS3O60504 671 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RAG1P15918 1043 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 RPL10P27635 214 aaKnown RBP3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 GBP2P32456 591 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 CCNFP41002 786 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 DAB2P98082 770 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 NMIQ13287 307 aaPredicted RBP3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 LAPTM5Q13571 262 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 DBX2Q6ZNG2 339 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 TMC4Q7Z404 712 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 SP8Q8IXZ3 490 aa3.36□□□□□ -1.87
RNU6-1048P-201ENST00000364054 LINC01599Q8WXQ3 324 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms