RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 MTMR10Q9NXD2 777 aa25.59■■□□□ 1.69
CD47-202ENST00000361309 HSP90AB4PQ58FF6 505 aa25.58■■□□□ 1.69
CD47-202ENST00000361309 DPP9Q86TI2 863 aa25.58■■□□□ 1.69
CD47-202ENST00000361309 PANK1Q8TE04 598 aa25.58■■□□□ 1.69
CD47-202ENST00000361309 SDR42E1Q8WUS8 393 aa25.58■■□□□ 1.69
CD47-202ENST00000361309 MOV10L1Q9BXT6 1211 aaKnown RBP25.58■■□□□ 1.69
CD47-202ENST00000361309 HOXC10Q9NYD6 342 aa25.58■■□□□ 1.69
CD47-202ENST00000361309 ZNF532Q9HCE3 1301 aa25.58■■□□□ 1.69
CD47-202ENST00000361309 IGHA2P01877 340 aa25.57■■□□□ 1.68
CD47-202ENST00000361309 ATN1P54259 1190 aaPredicted RBP25.57■■□□□ 1.68
CD47-202ENST00000361309 TANGO6Q9C0B7 1094 aa25.57■■□□□ 1.68
CD47-202ENST00000361309 DCP1AQ9NPI6 582 aaPredicted RBP25.57■■□□□ 1.68
CD47-202ENST00000361309 STXBP5LQ9Y2K9 1186 aa25.57■■□□□ 1.68
CD47-202ENST00000361309 COL11A1P12107 1806 aaPredicted RBP25.57■■□□□ 1.68
CD47-202ENST00000361309 LTBP2Q14767 1821 aa25.57■■□□□ 1.68
CD47-202ENST00000361309 SMCHD1A6NHR9 2005 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 DNM1LO00429 736 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 GOLIM4O00461 696 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 CYP2D6P10635 497 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 CYBAP13498 195 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 ADORA2AP29274 412 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 KIAA1755Q5JYT7 1200 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 LCORLQ8N3X6 602 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 SLC44A5Q8NCS7 719 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 DNAJC2Q99543 621 aaKnown RBP25.56■■□□□ 1.68
CD47-202ENST00000361309 SPATC1LQ9H0A9 340 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 MYH7P12883 1935 aa25.56■■□□□ 1.68
CD47-202ENST00000361309 TCRBV5S4A2TA0A5A2 114 aa25.55■■□□□ 1.68
CD47-202ENST00000361309 APBB1O00213 710 aa25.55■■□□□ 1.68
CD47-202ENST00000361309 CLASRPQ8N2M8 674 aaKnown RBP25.55■■□□□ 1.68
CD47-202ENST00000361309 LBHD1Q9BQE6 289 aaPredicted RBP25.55■■□□□ 1.68
CD47-202ENST00000361309 STRNO43815 780 aa25.54■■□□□ 1.68
CD47-202ENST00000361309 ERCC3P19447 782 aa25.54■■□□□ 1.68
CD47-202ENST00000361309 TMEM179Q6ZVK1 233 aa25.54■■□□□ 1.68
CD47-202ENST00000361309 PPIL4Q8WUA2 492 aaKnown RBP eCLIP25.54■■□□□ 1.68
CD47-202ENST00000361309 BCL11AQ9H165 835 aa25.54■■□□□ 1.68
CD47-202ENST00000361309 RTP1P59025 263 aa25.53■■□□□ 1.68
CD47-202ENST00000361309 GJC2Q5T442 439 aaPredicted RBP25.53■■□□□ 1.68
CD47-202ENST00000361309 OLFML2BQ68BL8 750 aa25.53■■□□□ 1.68
CD47-202ENST00000361309 SHCBP1Q8NEM2 672 aa25.53■■□□□ 1.68
CD47-202ENST00000361309 DYNLL2Q96FJ2 89 aa25.53■■□□□ 1.68
CD47-202ENST00000361309 UNC80Q8N2C7 3258 aa25.53■■□□□ 1.68
CD47-202ENST00000361309 PLXNA1Q9UIW2 1896 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 COBLO75128 1261 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 IFIT2P09913 472 aaKnown RBP25.52■■□□□ 1.68
CD47-202ENST00000361309 DSG3P32926 999 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 ANO1Q5XXA6 986 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 CLEC10AQ8IUN9 316 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 KIF1BPQ96EK5 621 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 ARMT1Q9H993 441 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 SWAP70Q9UH65 585 aa25.52■■□□□ 1.68
CD47-202ENST00000361309 PLS1Q14651 629 aa25.51■■□□□ 1.67
CD47-202ENST00000361309 SIAH1Q8IUQ4 282 aa25.51■■□□□ 1.67
CD47-202ENST00000361309 SPICE1Q8N0Z3 855 aa25.51■■□□□ 1.67
CD47-202ENST00000361309 MB21D1Q8N884 522 aa25.51■■□□□ 1.67
CD47-202ENST00000361309 ARRDC4Q8NCT1 418 aa25.51■■□□□ 1.67
CD47-202ENST00000361309 PRKAG2Q9UGJ0 569 aa25.51■■□□□ 1.67
CD47-202ENST00000361309 PRKAB2O43741 272 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 FLOT1O75955 427 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 AKR1B1P15121 316 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 SLFNL1Q499Z3 407 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 ATG4CQ96DT6 458 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 ARHGEF10LQ9HCE6 1279 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 ATP11BQ9Y2G3 1177 aa25.5■■□□□ 1.67
CD47-202ENST00000361309 KBTBD13C9JR72 458 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 ICA1Q05084 483 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 SLC39A5Q6ZMH5 540 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 NCAPG2Q86XI2 1143 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 MROH8Q9H579 483 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 SLC5A4Q9NY91 659 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 TMX2Q9Y320 296 aa25.49■■□□□ 1.67
CD47-202ENST00000361309 POTEB2H3BUK9 544 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 SEPT4O43236 478 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 MBD4O95243 580 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 MYCNP04198 464 aaPredicted RBP25.48■■□□□ 1.67
CD47-202ENST00000361309 ADD2P35612 726 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 PRAMEF19Q5SWL8 479 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 SAMD1Q6SPF0 538 aaPredicted RBP25.48■■□□□ 1.67
CD47-202ENST00000361309 VCPKMTQ9H867 229 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 ATP8A2Q9NTI2 1148 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 PAG1Q9NWQ8 432 aa25.48■■□□□ 1.67
CD47-202ENST00000361309 SMIM22K7EJ46 135 aa25.47■■□□□ 1.67
CD47-202ENST00000361309 SIRT2Q8IXJ6 389 aa25.47■■□□□ 1.67
CD47-202ENST00000361309 RPAP2Q8IXW5 612 aaPredicted RBP25.47■■□□□ 1.67
CD47-202ENST00000361309 ABRAQ8N0Z2 381 aa25.47■■□□□ 1.67
CD47-202ENST00000361309 BOLA2Q9H3K6 86 aa25.47■■□□□ 1.67
CD47-202ENST00000361309 SH2D4AQ9H788 454 aa25.47■■□□□ 1.67
CD47-202ENST00000361309 CYP2D7A0A087X1C5 515 aa25.46■■□□□ 1.67
CD47-202ENST00000361309 HMMRO75330 724 aa25.46■■□□□ 1.67
CD47-202ENST00000361309 FAM109BQ6ICB4 259 aaPredicted RBP25.46■■□□□ 1.67
CD47-202ENST00000361309 MAML3Q96JK9 1138 aa25.46■■□□□ 1.67
CD47-202ENST00000361309 WDR46O15213 610 aaKnown RBP25.45■■□□□ 1.66
CD47-202ENST00000361309 FCER1AP12319 257 aa25.45■■□□□ 1.66
CD47-202ENST00000361309 CDK8P49336 464 aa25.45■■□□□ 1.66
CD47-202ENST00000361309 TMEM132BQ14DG7 1078 aa25.45■■□□□ 1.66
CD47-202ENST00000361309 C12orf60Q5U649 245 aa25.45■■□□□ 1.66
CD47-202ENST00000361309 CCDC17Q96LX7 622 aa25.45■■□□□ 1.66
CD47-202ENST00000361309 RAB11FIP3O75154 756 aa25.44■■□□□ 1.66
CD47-202ENST00000361309 CHGBP05060 677 aa25.44■■□□□ 1.66
CD47-202ENST00000361309 MS4A1P11836 297 aa25.44■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 6.3 ms