RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 INSM2Q96T92 566 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 OSBPL2Q9H1P3 480 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 GPR108Q9NPR9 543 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 CDV3Q9UKY7 258 aaKnown RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 CHMP3Q9Y3E7 222 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 MAP4K5Q9Y4K4 846 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 FIBPO43427 364 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 ACPPP15309 386 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 MSNP26038 577 aaKnown RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 GRNP28799 593 aaKnown RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 FOXC1Q12948 553 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 KRT32Q14532 448 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 TTLL7Q6ZT98 887 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 TTC16Q8NEE8 873 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 NAP1L5Q96NT1 182 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 FUCA2Q9BTY2 467 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 FHDC1Q9C0D6 1143 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 COL5A2P05997 1499 aaPredicted RBP8.6□□□□□ -1.03
CLCN3-202ENST00000360642 TNS2Q63HR2 1409 aa8.6□□□□□ -1.03
CLCN3-202ENST00000360642 CPNE3O75131 537 aaKnown RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 CHGBP05060 677 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 MCM5P33992 734 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 MCMDC2Q4G0Z9 681 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 LARP1BQ659C4 914 aaKnown RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 KRT25Q7Z3Z0 450 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 CWC25Q9NXE8 425 aaPredicted RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 UBP1Q9NZI7 540 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 EFR3BQ9Y2G0 817 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 SHANK3Q9BYB0 1731 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 PALLDQ8WX93 1383 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 SIAH2O43255 324 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 MARCH6O60337 910 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 STK10O94804 968 aaKnown RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 IDH3AP50213 366 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 TMEM214Q6NUQ4 689 aaKnown RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 ZNF438Q7Z4V0 828 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 KBTBD3Q8NAB2 608 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 ANAPC16Q96DE5 110 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 TCEANC2Q96MN5 208 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 SEC62Q99442 399 aaKnown RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 ZKSCAN5Q9Y2L8 839 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 SOS2Q07890 1332 aaPredicted RBP8.59□□□□□ -1.03
CLCN3-202ENST00000360642 SH3TC1Q8TE82 1336 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 FAM221BA6H8Z2 402 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 OFD1O75665 1012 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 A1BGP04217 495 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 PDCP20941 246 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 CDC37L1Q7L3B6 337 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 C1orf127Q8N9H9 656 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 CCDC191Q8NCU4 936 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 NEK1Q96PY6 1258 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 ATG3Q9NT62 314 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 ELP1O95163 1332 aa8.59□□□□□ -1.03
CLCN3-202ENST00000360642 VPS37CA5D8V6 355 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-202ENST00000360642 MICAL2O94851 1124 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CYP21A2P08686 494 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CLN3Q13286 438 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 GRIN2CQ14957 1233 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CCDC129Q6ZRS4 1044 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 TOM1L2Q6ZVM7 507 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 PRICKLE2Q7Z3G6 844 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 HNRNPLLQ8WVV9 542 aaKnown RBP8.58□□□□□ -1.04
CLCN3-202ENST00000360642 ZSCAN10Q96SZ4 725 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-202ENST00000360642 C12orf49Q9H741 205 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 IL15P40933 162 aaPredicted RBP8.58□□□□□ -1.04
CLCN3-202ENST00000360642 NNTQ13423 1086 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 DDX46Q7L014 1031 aaKnown RBP8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CDK15Q96Q40 435 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CARD10Q9BWT7 1032 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 PRDM11Q9NQV5 511 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CNTN3Q9P232 1028 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 METTL12A8MUP2 240 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 CIAO1O76071 339 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 TTC6Q86TZ1 520 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 GTF3C6Q969F1 213 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 HELLSQ9NRZ9 838 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 ADAMTS1Q9UHI8 967 aa8.58□□□□□ -1.04
CLCN3-202ENST00000360642 EYA2O00167 538 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 IL2RBP14784 551 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 ZNF654Q8IZM8 581 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 ST7Q9NRC1 585 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 PAG1Q9NWQ8 432 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 PPT2Q9UMR5 302 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 TTF2Q9UNY4 1162 aaKnown RBP8.57□□□□□ -1.04
CLCN3-202ENST00000360642 CRKP46108 304 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 TIMM10P62072 90 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 KRT85P78386 507 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 LRRC24Q50LG9 513 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 C4orf17Q53FE4 359 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 LRRC69Q6ZNQ3 347 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 SRPK1Q96SB4 655 aaKnown RBP8.57□□□□□ -1.04
CLCN3-202ENST00000360642 ISCA1Q9BUE6 129 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.57□□□□□ -1.042e-6■■■■■ 41.9
CLCN3-202ENST00000360642 HRH3Q9Y5N1 445 aa8.57□□□□□ -1.04
CLCN3-202ENST00000360642 ABCA3Q99758 1704 aa8.56□□□□□ -1.04
CLCN3-202ENST00000360642 HCLS1P14317 486 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 ZNF157P51786 506 aaPredicted RBP8.56□□□□□ -1.04
CLCN3-202ENST00000360642 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms