RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 USP40Q9NVE5 1235 aa23.32■■□□□ 1.32
CBWD3-201ENST00000360171 A0A1B0GVL5 298 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 RAD17O75943 681 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 POLR3DP05423 398 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-201ENST00000360171 IARSP41252 1262 aaKnown RBP23.31■■□□□ 1.32
CBWD3-201ENST00000360171 WTAPQ15007 396 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 ZRSR1Q15695 479 aaKnown RBP23.31■■□□□ 1.32
CBWD3-201ENST00000360171 NFXL1Q6ZNB6 911 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 NBPF11Q86T75 865 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 MYL10Q9BUA6 226 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 VPS33BQ9H267 617 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 OGFRQ9NZT2 677 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 ORC3Q9UBD5 711 aaPredicted RBP23.31■■□□□ 1.32
CBWD3-201ENST00000360171 MYH8P13535 1937 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 NFKBIEO00221 500 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 PPFIA3O75145 1194 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 U2AF2P26368 475 aaKnown RBP eCLIP23.31■■□□□ 1.32
CBWD3-201ENST00000360171 PDE4BQ07343 736 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 PICALMQ13492 652 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 SART3Q15020 963 aaKnown RBP23.31■■□□□ 1.32
CBWD3-201ENST00000360171 FILIP1Q7Z7B0 1213 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 CCDC150Q8NCX0 1101 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 UBAC1Q9BSL1 405 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 MRIQ9BWK5 157 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 BCS1LQ9Y276 419 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 CLIC4Q9Y696 253 aa23.31■■□□□ 1.32
CBWD3-201ENST00000360171 HDLBPQ00341 1268 aaKnown RBP23.3■■□□□ 1.32
CBWD3-201ENST00000360171 FAM47AQ5JRC9 791 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 MICU3Q86XE3 530 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 AMOTL1Q8IY63 956 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 SLC44A5Q8NCS7 719 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 USP27XA6NNY8 438 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 PSMD14O00487 310 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 CMA1P23946 247 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 ENAHQ8N8S7 591 aaPredicted RBP23.3■■□□□ 1.32
CBWD3-201ENST00000360171 TIGD1Q96MW7 591 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 ZSCAN10Q96SZ4 725 aaPredicted RBP23.3■■□□□ 1.32
CBWD3-201ENST00000360171 TAOK3Q9H2K8 898 aa23.3■■□□□ 1.32
CBWD3-201ENST00000360171 NLRP12P59046 1061 aa23.29■■□□□ 1.32
CBWD3-201ENST00000360171 TPM4P67936 248 aa23.29■■□□□ 1.32
CBWD3-201ENST00000360171 PRDM10Q9NQV6 1147 aa23.29■■□□□ 1.32
CBWD3-201ENST00000360171 SIPA1L1O43166 1804 aa23.29■■□□□ 1.32
CBWD3-201ENST00000360171 ERICH2A1L162 156 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 ZBTB43O43298 467 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 TUBB4AP04350 444 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 CDC27P30260 824 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 METAP2P50579 478 aaKnown RBP eCLIP23.28■■□□□ 1.32
CBWD3-201ENST00000360171 RSBN1LQ6PCB5 846 aaPredicted RBP23.28■■□□□ 1.32
CBWD3-201ENST00000360171 SYNE3Q6ZMZ3 975 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 SERPINA10Q9UK55 444 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 CPLX1O14810 134 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 NMT2O60551 498 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 KIF23Q02241 960 aaPredicted RBP23.28■■□□□ 1.32
CBWD3-201ENST00000360171 DPCR1Q3MIW9 517 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 AXDND1Q5T1B0 1012 aaPredicted RBP23.28■■□□□ 1.32
CBWD3-201ENST00000360171 ANO1Q5XXA6 986 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 NIM1KQ8IY84 436 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 KIF18AQ8NI77 898 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 ZNRF3Q9ULT6 936 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 SLC12A7Q9Y666 1083 aa23.28■■□□□ 1.32
CBWD3-201ENST00000360171 ZNF202O95125 648 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 VIL1P09327 827 aaKnown RBP23.27■■□□□ 1.32
CBWD3-201ENST00000360171 RBM5P52756 815 aaKnown RBP eCLIP23.27■■□□□ 1.32
CBWD3-201ENST00000360171 NFIAQ12857 509 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 FAM217BQ9NTX9 383 aaPredicted RBP23.27■■□□□ 1.32
CBWD3-201ENST00000360171 NID2Q14112 1375 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 A0A087WWV3 80 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 IKBKBO14920 756 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 IQCA1Q86XH1 822 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 ERO1AQ96HE7 468 aa23.27■■□□□ 1.32
CBWD3-201ENST00000360171 GOLGA8AA7E2F4 631 aa23.26■■□□□ 1.31
CBWD3-201ENST00000360171 C16orf86Q6ZW13 317 aa23.26■■□□□ 1.31
CBWD3-201ENST00000360171 GMLQ99445 158 aa23.26■■□□□ 1.31
CBWD3-201ENST00000360171 TSPY2A6NKD2 308 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 CACNB3P54284 484 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 SLC39A14Q15043 492 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 OTUD7BQ6GQQ9 843 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 ZNF654Q8IZM8 581 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 TMTC2Q8N394 836 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 DDX41Q9UJV9 622 aaKnown RBP23.25■■□□□ 1.31
CBWD3-201ENST00000360171 MYO3BQ8WXR4 1341 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 RASA1P20936 1047 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 ZNF592Q92610 1267 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 ERCC4Q92889 916 aaPredicted RBP23.25■■□□□ 1.31
CBWD3-201ENST00000360171 MKNK2Q9HBH9 465 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 SPON1Q9HCB6 807 aa23.25■■□□□ 1.31
CBWD3-201ENST00000360171 ZBTB12Q9Y330 459 aaPredicted RBP23.25■■□□□ 1.31
CBWD3-201ENST00000360171 FAM237AA0A1B0GTK4 181 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 SPDYE4A6NLX3 237 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 NRDCO43847 1150 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 CDK8P49336 464 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 TFAP4Q01664 338 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 RASSF7Q02833 373 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 NCAPHQ15003 741 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 CFAP100Q494V2 611 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 XPO4Q9C0E2 1151 aaKnown RBP23.24■■□□□ 1.31
CBWD3-201ENST00000360171 PPP6R2O75170 966 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 CDKL5O76039 1030 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 PFKFB1P16118 471 aa23.24■■□□□ 1.31
CBWD3-201ENST00000360171 IFIT1BQ5T764 474 aaKnown RBP23.24■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms