RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 LONRF3Q496Y0 759 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 TUBE1Q9UJT0 475 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 SRPRBQ9Y5M8 271 aaKnown RBP23.18■■□□□ 1.3
BRD4-202ENST00000360016 ZNF579Q8NAF0 562 aaKnown RBP23.18■■□□□ 1.3
BRD4-202ENST00000360016 COA1Q9GZY4 146 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 KCNF1Q9H3M0 494 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 ZNF287Q9HBT7 754 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 NRBP1Q9UHY1 535 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 RASA1P20936 1047 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 PTGS1P23219 599 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 PFKFB3Q16875 520 aaPredicted RBP23.18■■□□□ 1.3
BRD4-202ENST00000360016 ZNF772Q68DY9 489 aaPredicted RBP23.18■■□□□ 1.3
BRD4-202ENST00000360016 KRBA2Q6ZNG9 492 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 PIBF1Q8WXW3 757 aa23.18■■□□□ 1.3
BRD4-202ENST00000360016 FLT1P17948 1338 aa23.17■■□□□ 1.3
BRD4-202ENST00000360016 TRIM75PA6NK02 468 aa23.17■■□□□ 1.3
BRD4-202ENST00000360016 TNFRSF25Q93038 417 aa23.17■■□□□ 1.3
BRD4-202ENST00000360016 CDC25BP30305 580 aa23.17■■□□□ 1.3
BRD4-202ENST00000360016 CNNM3Q8NE01 707 aa23.17■■□□□ 1.3
BRD4-202ENST00000360016 MORC2Q9Y6X9 1032 aaPredicted RBP23.17■■□□□ 1.3
BRD4-202ENST00000360016 C16orf86Q6ZW13 317 aa23.16■■□□□ 1.3
BRD4-202ENST00000360016 FLAD1Q8NFF5 587 aa23.16■■□□□ 1.3
BRD4-202ENST00000360016 DDX60LQ5H9U9 1706 aaKnown RBP23.16■■□□□ 1.3
BRD4-202ENST00000360016 CDK8P49336 464 aa23.16■■□□□ 1.3
BRD4-202ENST00000360016 PNOCQ13519 176 aa23.16■■□□□ 1.3
BRD4-202ENST00000360016 GRM4Q14833 912 aa23.16■■□□□ 1.3
BRD4-202ENST00000360016 METTL16Q86W50 562 aaKnown RBP23.16■■□□□ 1.3
BRD4-202ENST00000360016 ALDH1B1P30837 517 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 PDE6BP35913 854 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 ELOA2Q8IYF1 753 aaPredicted RBP23.15■■□□□ 1.3
BRD4-202ENST00000360016 MRFAP1L1Q96HT8 127 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 ZC3H12CQ9C0D7 883 aaKnown RBP23.15■■□□□ 1.3
BRD4-202ENST00000360016 CLIP2Q9UDT6 1046 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 VEGFAP15692 232 aaPredicted RBP23.15■■□□□ 1.3
BRD4-202ENST00000360016 OLFM4Q6UX06 510 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 CCDC186Q7Z3E2 898 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 STAG2Q8N3U4 1231 aa23.15■■□□□ 1.3
BRD4-202ENST00000360016 MMP10P09238 476 aa23.14■■□□□ 1.3
BRD4-202ENST00000360016 NLRP5P59047 1200 aa23.14■■□□□ 1.3
BRD4-202ENST00000360016 DAGLAQ9Y4D2 1042 aa23.14■■□□□ 1.3
BRD4-202ENST00000360016 PARP3Q9Y6F1 533 aa23.14■■□□□ 1.3
BRD4-202ENST00000360016 BAZ2BQ9UIF8 2168 aaKnown RBP23.14■■□□□ 1.3
BRD4-202ENST00000360016 MAD2L2Q9UI95 211 aa23.14■■□□□ 1.29
BRD4-202ENST00000360016 GNAQP50148 359 aa23.14■■□□□ 1.29
BRD4-202ENST00000360016 NOM1Q5C9Z4 860 aaKnown RBP23.14■■□□□ 1.29
BRD4-202ENST00000360016 TMEM47Q9BQJ4 181 aa23.14■■□□□ 1.29
BRD4-202ENST00000360016 STX8Q9UNK0 236 aa23.14■■□□□ 1.29
BRD4-202ENST00000360016 ISM2Q6H9L7 571 aa23.13■■□□□ 1.29
BRD4-202ENST00000360016 EYA3Q99504 573 aa23.13■■□□□ 1.29
BRD4-202ENST00000360016 CSRNP2Q9H175 543 aa23.13■■□□□ 1.29
BRD4-202ENST00000360016 SUGT1Q9Y2Z0 365 aa23.13■■□□□ 1.29
BRD4-202ENST00000360016 MYH1P12882 1939 aa23.13■■□□□ 1.29
BRD4-202ENST00000360016 RIOK3O14730 519 aaKnown RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 BMP15O95972 392 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 DPP8Q6V1X1 898 aaPredicted RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 ZNF710Q8N1W2 664 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 SNED1Q8TER0 1413 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 POLR2DO15514 142 aaKnown RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 MDM2Q00987 491 aaPredicted RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 TRERF1Q96PN7 1200 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 TRMT1Q9NXH9 659 aaKnown RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 WNT7AO00755 349 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 FOXP4Q8IVH2 680 aaPredicted RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 NEDD1Q8NHV4 660 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 MASTLQ96GX5 879 aa23.12■■□□□ 1.29
BRD4-202ENST00000360016 HOOK1Q9UJC3 728 aaKnown RBP23.12■■□□□ 1.29
BRD4-202ENST00000360016 DYNC1I1O14576 645 aa23.11■■□□□ 1.29
BRD4-202ENST00000360016 TTC38Q5R3I4 469 aa23.11■■□□□ 1.29
BRD4-202ENST00000360016 KIAA1524Q8TCG1 905 aa23.11■■□□□ 1.29
BRD4-202ENST00000360016 SH3GLB2Q9NR46 395 aa23.11■■□□□ 1.29
BRD4-202ENST00000360016 PCDHA5Q9Y5H7 936 aa23.11■■□□□ 1.29
BRD4-202ENST00000360016 COL11A2P13942 1736 aaPredicted RBP23.11■■□□□ 1.29
BRD4-202ENST00000360016 SMTNL1A8MU46 457 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 ZNF174Q15697 407 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 CERS5Q8N5B7 392 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 SERTAD1Q9UHV2 236 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 FOCADQ5VW36 1801 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 FOXN1O15353 648 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 CALML3P27482 149 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 USP49Q70CQ1 688 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 F8W031 263 aaPredicted RBP23.1■■□□□ 1.29
BRD4-202ENST00000360016 DOK7Q18PE1 504 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 FERMT2Q96AC1 680 aa23.1■■□□□ 1.29
BRD4-202ENST00000360016 TMX4Q9H1E5 349 aaPredicted RBP23.1■■□□□ 1.29
BRD4-202ENST00000360016 PALM3A6NDB9 673 aaPredicted RBP23.09■■□□□ 1.29
BRD4-202ENST00000360016 NCAPHQ15003 741 aa23.09■■□□□ 1.29
BRD4-202ENST00000360016 PIK3AP1Q6ZUJ8 805 aa23.09■■□□□ 1.29
BRD4-202ENST00000360016 SPTLC3Q9NUV7 552 aa23.09■■□□□ 1.29
BRD4-202ENST00000360016 MTMR7Q9Y216 660 aa23.09■■□□□ 1.29
BRD4-202ENST00000360016 SLC35G1Q2M3R5 365 aa23.09■■□□□ 1.29
BRD4-202ENST00000360016 MSL1Q68DK7 614 aa23.09■■□□□ 1.29
BRD4-202ENST00000360016 GPKOWQ92917 476 aaPredicted RBP eCLIP23.09■■□□□ 1.29
BRD4-202ENST00000360016 IKBKBO14920 756 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 ADAMTS3O15072 1205 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 TRAPPC10P48553 1259 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 TPM4P67936 248 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 ARID5BQ14865 1188 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 POSTNQ15063 836 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 CCDC144BQ3MJ40 725 aa23.08■■□□□ 1.29
BRD4-202ENST00000360016 FILIP1Q7Z7B0 1213 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms