RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 PSDA5PKW4 1024 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 BTBD18B2RXH4 712 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 RAD17O75943 681 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 LDHCP07864 332 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 TSPY3P0CV98 308 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 TSPY8P0CW00 308 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 ME1P48163 572 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 KIF23Q02241 960 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 PDE4BQ07343 736 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 GNL2Q13823 731 aaKnown RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 IQCA1Q86XH1 822 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 STAG2Q8N3U4 1231 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 YY1AP1Q9H869 796 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 DACT1Q9NYF0 836 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 VPS54Q9P1Q0 977 aa5.89□□□□□ -1.47
ATXN3-202ENST00000359366 V9GY48 417 aaPredicted RBP5.89□□□□□ -1.47
ATXN3-202ENST00000359366 FAM205AQ6ZU69 1335 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 YDJCA8MPS7 323 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 PPIP5K2O43314 1243 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 FMNL1O95466 1100 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 RASA1P20936 1047 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CDK8P49336 464 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 ZNF445P59923 1031 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 PPP4CP60510 307 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 TROAPQ12815 778 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 STYK1Q6J9G0 422 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CDC42EP5Q6NZY7 148 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CATIPQ7Z7H3 387 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CRACR2BQ8N4Y2 399 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 SRBD1Q8N5C6 995 aaKnown RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 C7orf43Q8WVR3 580 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 ZSCAN16Q9H4T2 348 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 KIF3AQ9Y496 699 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 MRVI1Q9Y6F6 885 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 DDX60LQ5H9U9 1706 aaKnown RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 A0A1B0GVL5 298 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 ORC4O43929 436 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 WDHD1O75717 1129 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CDKL5O76039 1030 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 SLC3A2P08195 630 aaKnown RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 FGRP09769 529 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 IFNAR1P17181 557 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 KCNA3P22001 575 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CRKP46108 304 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 NASPP49321 788 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 MRE11P49959 708 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 R3HDM1Q15032 1099 aaKnown RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 SBK1Q52WX2 424 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 SPECC1Q5M775 1068 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CCDC183Q5T5S1 534 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 APOBEC3HQ6NTF7 200 aaKnown RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 CPLX2Q6PUV4 134 aaKnown RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 LRSAM1Q6UWE0 723 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 ZNF444Q8N0Y2 327 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 TBC1D22AQ8WUA7 517 aa5.88□□□□□ -1.47
ATXN3-202ENST00000359366 GPKOWQ92917 476 aaPredicted RBP eCLIP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 SCAND2PQ9GZW5 306 aaPredicted RBP5.88□□□□□ -1.47
ATXN3-202ENST00000359366 GAKO14976 1311 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 SHTN1A0MZ66 631 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 RAD21O60216 631 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 ATP2B2Q01814 1243 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 FUT2Q10981 343 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 PKN1Q16512 942 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 SLC35G1Q2M3R5 365 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 EARS2Q5JPH6 523 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 DACT2Q5SW24 774 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 MYSM1Q5VVJ2 828 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TMC4Q7Z404 712 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 CCAR1Q8IX12 1150 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 PNMA1Q8ND90 353 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 CNKSR1Q969H4 720 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 EYA3Q99504 573 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 PCDHA7Q9UN72 937 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 COL4A5P29400 1685 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 WNT7AO00755 349 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 AKR1B1P15121 316 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TRIM29Q14134 588 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 STK38Q15208 465 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 SF3A1Q15459 793 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 DNTTIP2Q5QJE6 756 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 AMOTL1Q8IY63 956 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 DIS3L2Q8IYB7 885 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TRIM22Q8IYM9 498 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 LRRC47Q8N1G4 583 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TTLL6Q8N841 843 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 FSIP1Q8NA03 581 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TEKT1Q969V4 418 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 CEP95Q96GE4 821 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 CLIC6Q96NY7 704 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TMEM47Q9BQJ4 181 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TSPY26PQ9H489 355 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 TDRD3Q9H7E2 651 aaKnown RBP5.87□□□□□ -1.47
ATXN3-202ENST00000359366 KAT14Q9H8E8 782 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 VAT1LQ9HCJ6 419 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 KCNG1Q9UIX4 513 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 CFAP45Q9UL16 551 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 PCNTO95613 3336 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 SNED1Q8TER0 1413 aa5.87□□□□□ -1.47
ATXN3-202ENST00000359366 CLRN2A0PK11 232 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms