RNA–Protein interactions for RNA: ENST00000359238.6

SNX11-201, Transcript of sorting nexin 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX11, Length 2,315 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-201ENST00000359238 TEX11Q8IYF3 940 aa21.32■■□□□ 1
SNX11-201ENST00000359238 CLIC4Q9Y696 253 aa21.32■■□□□ 1
SNX11-201ENST00000359238 USP17L3A6NCW0 530 aa21.31■■□□□ 1
SNX11-201ENST00000359238 USP17L4A6NCW7 530 aa21.31■■□□□ 1
SNX11-201ENST00000359238 SKILP12757 684 aa21.31■■□□□ 1
SNX11-201ENST00000359238 H2AFXP16104 143 aaPredicted RBP21.31■■□□□ 1
SNX11-201ENST00000359238 IFNAR1P17181 557 aa21.31■■□□□ 1
SNX11-201ENST00000359238 USP17L1Q7RTZ2 530 aa21.31■■□□□ 1
SNX11-201ENST00000359238 ST7Q9NRC1 585 aa21.31■■□□□ 1
SNX11-201ENST00000359238 KCNJ14Q9UNX9 436 aa21.31■■□□□ 1
SNX11-201ENST00000359238 FMNL1O95466 1100 aaPredicted RBP21.3■■□□□ 1
SNX11-201ENST00000359238 CCDC93Q567U6 631 aa21.3■■□□□ 1
SNX11-201ENST00000359238 CC2D2BQ6DHV5 1058 aa21.3■■□□□ 1
SNX11-201ENST00000359238 SLF2Q8IX21 1173 aa21.3■■□□□ 1
SNX11-201ENST00000359238 DDX4Q9NQI0 724 aaKnown RBP21.3■■□□□ 1
SNX11-201ENST00000359238 TFAP4Q01664 338 aa21.3■■□□□ 1
SNX11-201ENST00000359238 KIAA0825Q8IV33 1275 aa21.3■■□□□ 1
SNX11-201ENST00000359238 FAM163AQ96GL9 167 aaPredicted RBP21.3■■□□□ 1
SNX11-201ENST00000359238 TSPY2A6NKD2 308 aa21.29■■□□□ 1
SNX11-201ENST00000359238 VEGFAP15692 232 aaPredicted RBP21.29■■□□□ 1
SNX11-201ENST00000359238 FUT2Q10981 343 aa21.29■■□□□ 1
SNX11-201ENST00000359238 SYNE3Q6ZMZ3 975 aa21.29■■□□□ 1
SNX11-201ENST00000359238 CCAR2Q8N163 923 aaKnown RBP21.29■■□□□ 1
SNX11-201ENST00000359238 CRACR2BQ8N4Y2 399 aaPredicted RBP21.29■■□□□ 1
SNX11-201ENST00000359238 NR1I2O75469 434 aa21.29■■□□□ 1
SNX11-201ENST00000359238 PICALMQ13492 652 aa21.29■■□□□ 1
SNX11-201ENST00000359238 IQCB1Q15051 598 aa21.29■■□□□ 1
SNX11-201ENST00000359238 IQCA1Q86XH1 822 aa21.29■■□□□ 1
SNX11-201ENST00000359238 SUGT1Q9Y2Z0 365 aa21.29■■□□□ 1
SNX11-201ENST00000359238 GOLGA6L19H0YKK7 550 aa21.28■■□□□ 1
SNX11-201ENST00000359238 CCZ1BP86790 482 aa21.28■■□□□ 1
SNX11-201ENST00000359238 CCZ1P86791 482 aaPredicted RBP21.28■■□□□ 1
SNX11-201ENST00000359238 SSRP1Q08945 709 aaKnown RBP21.28■■□□□ 1
SNX11-201ENST00000359238 GOLPH3LQ9H4A5 285 aa21.28■■□□□ 1
SNX11-201ENST00000359238 ZNF277Q9NRM2 450 aaPredicted RBP21.28■■□□□ 1
SNX11-201ENST00000359238 ARID5BQ14865 1188 aa21.28■■□□□ 1
SNX11-201ENST00000359238 DACT2Q5SW24 774 aa21.28■■□□□ 1
SNX11-201ENST00000359238 STRIP1Q5VSL9 837 aa21.28■■□□□ 1
SNX11-201ENST00000359238 MTA3Q9BTC8 594 aa21.28■■□□□ 1
SNX11-201ENST00000359238 RCOR1Q9UKL0 485 aa21.28■■□□□ 1
SNX11-201ENST00000359238 ROBO3Q96MS0 1386 aa21.28■■□□□ 1
SNX11-201ENST00000359238 YDJCA8MPS7 323 aa21.27■■□□□ 1
SNX11-201ENST00000359238 CDKL5O76039 1030 aa21.27■■□□□ 1
SNX11-201ENST00000359238 HNRNPH2P55795 449 aaKnown RBP21.27■■□□□ 1
SNX11-201ENST00000359238 PDE4BQ07343 736 aa21.27■■□□□ 1
SNX11-201ENST00000359238 MYSM1Q5VVJ2 828 aa21.27■■□□□ 1
SNX11-201ENST00000359238 SUPT20HQ8NEM7 779 aa21.27■■□□□ 1
SNX11-201ENST00000359238 L2HGDHQ9H9P8 463 aa21.27■■□□□ 1
SNX11-201ENST00000359238 FHOD1Q9Y613 1164 aa21.27■■□□□ 1
SNX11-201ENST00000359238 RASA1P20936 1047 aa21.27■□□□□ 0.99
SNX11-201ENST00000359238 PKN1Q16512 942 aa21.27■□□□□ 0.99
SNX11-201ENST00000359238 TMTC2Q8N394 836 aa21.27■□□□□ 0.99
SNX11-201ENST00000359238 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.27■□□□□ 0.99
SNX11-201ENST00000359238 PIM2Q9P1W9 311 aa21.27■□□□□ 0.99
SNX11-201ENST00000359238 PLCG2P16885 1265 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 RTKN2Q8IZC4 609 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 KIF13BQ9NQT8 1826 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 WDHD1O75717 1129 aaPredicted RBP21.26■□□□□ 0.99
SNX11-201ENST00000359238 SLC3A2P08195 630 aaKnown RBP21.26■□□□□ 0.99
SNX11-201ENST00000359238 PCP11498 1178 aaKnown RBP21.26■□□□□ 0.99
SNX11-201ENST00000359238 CACNB3P54284 484 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 TGFB2P61812 414 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 CPLX2Q6PUV4 134 aaKnown RBP21.26■□□□□ 0.99
SNX11-201ENST00000359238 OXER1Q8TDS5 423 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 CFAP45Q9UL16 551 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 MTMR7Q9Y216 660 aa21.26■□□□□ 0.99
SNX11-201ENST00000359238 STK36Q9NRP7 1315 aa21.25■□□□□ 0.99
SNX11-201ENST00000359238 BTBD18B2RXH4 712 aa21.25■□□□□ 0.99
SNX11-201ENST00000359238 ADAMTS3O15072 1205 aa21.25■□□□□ 0.99
SNX11-201ENST00000359238 CERS3Q8IU89 383 aa21.25■□□□□ 0.99
SNX11-201ENST00000359238 SRBD1Q8N5C6 995 aaKnown RBP21.25■□□□□ 0.99
SNX11-201ENST00000359238 TEKT1Q969V4 418 aa21.25■□□□□ 0.99
SNX11-201ENST00000359238 MKNK2Q9HBH9 465 aa21.25■□□□□ 0.99
SNX11-201ENST00000359238 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.24■□□□□ 0.99
SNX11-201ENST00000359238 NFIAQ12857 509 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 NR5A1Q13285 461 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 ZFPM1Q8IX07 1006 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 AMOTL1Q8IY63 956 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 BICD2Q8TD16 824 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 TRMT1Q9NXH9 659 aaKnown RBP21.24■□□□□ 0.99
SNX11-201ENST00000359238 COL4A5P29400 1685 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 CRKP46108 304 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 CDK8P49336 464 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 APOBEC3HQ6NTF7 200 aaKnown RBP21.24■□□□□ 0.99
SNX11-201ENST00000359238 CATIPQ7Z7H3 387 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 STAG2Q8N3U4 1231 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 LARGE2Q8N3Y3 721 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 LINC00301Q8NCQ3 95 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 PSMD1Q99460 953 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 PCDHA7Q9UN72 937 aa21.24■□□□□ 0.99
SNX11-201ENST00000359238 SLC35G1Q2M3R5 365 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 SGIP1Q9BQI5 828 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 VPS54Q9P1Q0 977 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 V9GY48 417 aaPredicted RBP21.23■□□□□ 0.99
SNX11-201ENST00000359238 FAM205CA6NFA0 338 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 NOM1Q5C9Z4 860 aaKnown RBP21.23■□□□□ 0.99
SNX11-201ENST00000359238 CDC42EP5Q6NZY7 148 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 CLEC10AQ8IUN9 316 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 USP40Q9NVE5 1235 aa21.23■□□□□ 0.99
SNX11-201ENST00000359238 FEZ2Q9UHY8 353 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms