RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PCDHB6Q9Y5E3 794 aa17.09■□□□□ 0.33
GABPB1-202ENST00000359031 SRPRBQ9Y5M8 271 aaKnown RBP17.09■□□□□ 0.33
GABPB1-202ENST00000359031 TRIM75PA6NK02 468 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 TSPY3P0CV98 308 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 TSPY8P0CW00 308 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 NPR1P16066 1061 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 PFKFB3Q16875 520 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-202ENST00000359031 DPCR1Q3MIW9 517 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 KRBA2Q6ZNG9 492 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 ZNF444Q8N0Y2 327 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-202ENST00000359031 AOPEPQ8N6M6 819 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 ERCC4Q92889 916 aaPredicted RBP17.08■□□□□ 0.32
GABPB1-202ENST00000359031 TNFRSF25Q93038 417 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 DYNLL2Q96FJ2 89 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 CABP5Q9NP86 173 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 IL17RBQ9NRM6 502 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 FLT1P17948 1338 aa17.08■□□□□ 0.32
GABPB1-202ENST00000359031 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.07■□□□□ 0.32
GABPB1-202ENST00000359031 C16orf86Q6ZW13 317 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 PNMA1Q8ND90 353 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 SRGNP10124 158 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 RASA1P20936 1047 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 PDE6BP35913 854 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 RHBDL3P58872 404 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 TPM4P67936 248 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 NPY5RQ15761 445 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 SLC4A8Q2Y0W8 1093 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 DRC7Q8IY82 874 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 MPNDQ8N594 471 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 CNNM3Q8NE01 707 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 ZNF830Q96NB3 372 aaPredicted RBP17.07■□□□□ 0.32
GABPB1-202ENST00000359031 KCNF1Q9H3M0 494 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 SH3GLB2Q9NR46 395 aa17.07■□□□□ 0.32
GABPB1-202ENST00000359031 MYH8P13535 1937 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 A0A087WWV3 80 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 hCG_1642624A0A1W2PR95 340 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 SMTNL1A8MU46 457 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 CALML3P27482 149 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 ALDH1B1P30837 517 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 TRAPPC10P48553 1259 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 TERF1P54274 439 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 FAM177A1Q8N128 213 aaPredicted RBP17.06■□□□□ 0.32
GABPB1-202ENST00000359031 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
GABPB1-202ENST00000359031 SAP30BPQ9UHR5 308 aaKnown RBP17.06■□□□□ 0.32
GABPB1-202ENST00000359031 PLCD1P51178 756 aa17.05■□□□□ 0.32
GABPB1-202ENST00000359031 METTL16Q86W50 562 aaKnown RBP17.05■□□□□ 0.32
GABPB1-202ENST00000359031 FERMT2Q96AC1 680 aa17.05■□□□□ 0.32
GABPB1-202ENST00000359031 LZTS2Q9BRK4 669 aa17.05■□□□□ 0.32
GABPB1-202ENST00000359031 SPTLC3Q9NUV7 552 aa17.05■□□□□ 0.32
GABPB1-202ENST00000359031 IKBKBO14920 756 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 PTGS1P23219 599 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 NLRP5P59047 1200 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 LONRF3Q496Y0 759 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 SLC44A5Q8NCS7 719 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 PARP3Q9Y6F1 533 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 PLIN4Q96Q06 1357 aa17.04■□□□□ 0.32
GABPB1-202ENST00000359031 USP17L3A6NCW0 530 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 USP17L4A6NCW7 530 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 FAM205CA6NFA0 338 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 BIN1O00499 593 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 KIF3CO14782 793 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 CDK8P49336 464 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 GTF2IP78347 998 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 PNOCQ13519 176 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 TTC38Q5R3I4 469 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 USP17L1Q7RTZ2 530 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 CCDC186Q7Z3E2 898 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 NEDD1Q8NHV4 660 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 FBXW7Q969H0 707 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 CCDC34Q96HJ3 373 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 EYA3Q99504 573 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 DAGLAQ9Y4D2 1042 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 C10orf71Q711Q0 1435 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 ATP2B1P20020 1258 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 APLP1P51693 650 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 GRIN1Q05586 938 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 NOLC1Q14978 699 aaKnown RBP eCLIP17.03■□□□□ 0.32
GABPB1-202ENST00000359031 EARS2Q5JPH6 523 aaKnown RBP17.03■□□□□ 0.32
GABPB1-202ENST00000359031 CCDC148Q8NFR7 591 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 KIAA1524Q8TCG1 905 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 MASTLQ96GX5 879 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 TMEM47Q9BQJ4 181 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 ZC3H12CQ9C0D7 883 aaKnown RBP17.03■□□□□ 0.32
GABPB1-202ENST00000359031 CSRNP2Q9H175 543 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 TMX4Q9H1E5 349 aaPredicted RBP17.03■□□□□ 0.32
GABPB1-202ENST00000359031 MAD2L2Q9UI95 211 aa17.03■□□□□ 0.32
GABPB1-202ENST00000359031 MYO1BO43795 1136 aa17.02■□□□□ 0.31
GABPB1-202ENST00000359031 POSTNQ15063 836 aa17.02■□□□□ 0.31
GABPB1-202ENST00000359031 OLFM4Q6UX06 510 aa17.02■□□□□ 0.31
GABPB1-202ENST00000359031 DPP8Q6V1X1 898 aaPredicted RBP17.02■□□□□ 0.31
GABPB1-202ENST00000359031 ADAMTSL1Q8N6G6 1762 aa17.02■□□□□ 0.31
GABPB1-202ENST00000359031 PALM3A6NDB9 673 aaPredicted RBP17.01■□□□□ 0.31
GABPB1-202ENST00000359031 RIMBP2O15034 1052 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 POLR2DO15514 142 aaKnown RBP17.01■□□□□ 0.31
GABPB1-202ENST00000359031 NEMFO60524 1076 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 TPM2P07951 284 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 MMP10P09238 476 aa17.01■□□□□ 0.31
GABPB1-202ENST00000359031 NOVP48745 357 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms