RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 DAAM2Q86T65 1068 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 PNMA1Q8ND90 353 aa15.26■□□□□ 0.03
VCP-201ENST00000358901 DNM2P50570 870 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 GGA1Q9UJY5 639 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 BIRC3Q13489 604 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 SFMBT2Q5VUG0 894 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 MAEAQ7L5Y9 396 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 ARHGEF25Q86VW2 580 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 SYMPKQ92797 1274 aaKnown RBP15.25■□□□□ 0.03
VCP-201ENST00000358901 OSBP2Q969R2 916 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 LZTS2Q9BRK4 669 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 BIN2Q9UBW5 565 aaPredicted RBP15.25■□□□□ 0.03
VCP-201ENST00000358901 DNM3Q9UQ16 869 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 FAM170AA1A519 330 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 EYA3Q99504 573 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 CCNL1Q9UK58 526 aaPredicted RBP15.25■□□□□ 0.03
VCP-201ENST00000358901 ATP7BP35670 1465 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 CLASP1Q7Z460 1538 aa15.25■□□□□ 0.03
VCP-201ENST00000358901 H7C1D1 291 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 COBLO75128 1261 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 FLOT1O75955 427 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 SCG2P13521 617 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 KIF23Q02241 960 aaPredicted RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 RPGRIP1Q96KN7 1286 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 HINFPQ9BQA5 517 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 HAUS4Q9H6D7 363 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 GPR108Q9NPR9 543 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 EPN1Q9Y6I3 576 aaPredicted RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 RESTQ13127 1097 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 RBM26Q5T8P6 1007 aaKnown RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 GPKOWQ92917 476 aaPredicted RBP eCLIP15.24■□□□□ 0.03
VCP-201ENST00000358901 UTP11Q9Y3A2 253 aaKnown RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 MYCNP04198 464 aaPredicted RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 KRT5P13647 590 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 CASP14P31944 242 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 TECP42680 631 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 RUFY4Q6ZNE9 571 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 PEX26Q7Z412 305 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 NKIRAS1Q9NYS0 192 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 CTTNBP2NLQ9P2B4 639 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 GTPBP6O43824 516 aaPredicted RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 SF3A3Q12874 501 aaKnown RBP eCLIP15.24■□□□□ 0.032e-6■■■□□ 15.5
VCP-201ENST00000358901 ANKRD13CQ8N6S4 541 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 CSRNP2Q9H175 543 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 GLT8D2Q9H1C3 349 aa15.24■□□□□ 0.03
VCP-201ENST00000358901 GPHNQ9NQX3 736 aaPredicted RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 ARPP21Q9UBL0 812 aaPredicted RBP15.24■□□□□ 0.03
VCP-201ENST00000358901 ARHGEF35A5YM69 484 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 CCDC169A6NNP5 214 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 TRIM58Q8NG06 486 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 CABS1Q96KC9 395 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 ROBO2Q9HCK4 1378 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 HGSO14964 777 aaPredicted RBP15.23■□□□□ 0.03
VCP-201ENST00000358901 CDC25BP30305 580 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 AIFM3Q96NN9 605 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 USP6P35125 1406 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 M0R2C6 588 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 IKBKBO14920 756 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 CALUO43852 315 aaPredicted RBP15.23■□□□□ 0.03
VCP-201ENST00000358901 GOLGA8HP0CJ92 632 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 HARSP12081 509 aaKnown RBP15.23■□□□□ 0.03
VCP-201ENST00000358901 ZYXQ15942 572 aaKnown RBP15.23■□□□□ 0.03
VCP-201ENST00000358901 SMYD4Q8IYR2 804 aaPredicted RBP15.23■□□□□ 0.03
VCP-201ENST00000358901 CEP83Q9Y592 693 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 PCDHB13Q9Y5F0 798 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 MED23Q9ULK4 1368 aa15.23■□□□□ 0.03
VCP-201ENST00000358901 A6NNZ2 444 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 UBAP1LF5GYI3 381 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 EXOC3O60645 756 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 PPP6R2O75170 966 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 NR5A1Q13285 461 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 TUBB8Q3ZCM7 444 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 GRAMD1CQ8IYS0 662 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 TOM1O60784 492 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 GCNT3O95395 438 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 USH1GQ495M9 461 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 CCDC63Q8NA47 563 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 FNBP1Q96RU3 617 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 KLRF2D3W0D1 207 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 SETDB1Q15047 1291 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 KRT71Q3SY84 523 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 GBP6Q6ZN66 633 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 MYCT1Q8N699 235 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 RBM17Q96I25 401 aaKnown RBP15.22■□□□□ 0.03
VCP-201ENST00000358901 GSDMAQ96QA5 445 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 CDCA7Q9BWT1 371 aaPredicted RBP15.22■□□□□ 0.03
VCP-201ENST00000358901 PUS7LQ9H0K6 701 aaKnown RBP15.22■□□□□ 0.03
VCP-201ENST00000358901 TSKSQ9UJT2 592 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 ZDHHC9Q9Y397 364 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 BCORL1Q5H9F3 1711 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 RPN1P04843 607 aaKnown RBP15.22■□□□□ 0.03
VCP-201ENST00000358901 GUCY2FP51841 1108 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 TCP10Q12799 353 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 RABGGTAQ92696 567 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 CDC23Q9UJX2 597 aa15.22■□□□□ 0.03
VCP-201ENST00000358901 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.22■□□□□ 0.03
VCP-201ENST00000358901 ABCA8O94911 1581 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 CIAO1O76071 339 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 ARID5BQ14865 1188 aa15.21■□□□□ 0.03
VCP-201ENST00000358901 ZNF365Q70YC5 407 aa15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms