RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 GUCY1A2P33402 732 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 GTF2IP78347 998 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 DHX8Q14562 1220 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 DACT2Q5SW24 774 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 DHX40Q8IX18 779 aaKnown RBP16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 CRACR2BQ8N4Y2 399 aaPredicted RBP16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 FANCBQ8NB91 859 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 TIGD1Q96MW7 591 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 KIAA1468Q9P260 1216 aa16.43■□□□□ 0.22
NIPAL3-203ENST00000358028 MYH6P13533 1939 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 MYH2Q9UKX2 1941 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 A0A087WWV3 80 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 SMIM22K7EJ46 135 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 POTEIP0CG38 1075 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 POTEJP0CG39 1038 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 PCP11498 1178 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 LMOD1P29536 600 aaPredicted RBP16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 EPHX2P34913 555 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 MECOMQ03112 1051 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 SAFBQ15424 915 aaKnown RBP eCLIP16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 ZRSR1Q15695 479 aaKnown RBP16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 RSBN1LQ6PCB5 846 aaPredicted RBP16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 NUP133Q8WUM0 1156 aa16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 ERCC4Q92889 916 aaPredicted RBP16.42■□□□□ 0.22
NIPAL3-203ENST00000358028 CYP2D7A0A087X1C5 515 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 ZBTB22O15209 634 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 FGRP09769 529 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 HTRA3P83110 453 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 RBM10P98175 930 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 STRIP1Q5VSL9 837 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 CTR9Q6PD62 1173 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 NOSTRINQ8IVI9 506 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 ZSCAN10Q96SZ4 725 aaPredicted RBP16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 POLR2AP24928 1970 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 FAM237AA0A1B0GTK4 181 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 CUTAO60888 179 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 SLC3A2P08195 630 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 PPP2R5BQ15173 497 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 SHC4Q6S5L8 630 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 MICALL2Q8IY33 904 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 DIS3L2Q8IYB7 885 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 CRNKL1Q9BZJ0 848 aaKnown RBP16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 NRBP1Q9UHY1 535 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 HPSEQ9Y251 543 aa16.41■□□□□ 0.22
NIPAL3-203ENST00000358028 RPS12P25398 132 aaKnown RBP16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 RESP18Q5W5W9 173 aa16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 TMED8Q6PL24 325 aaPredicted RBP16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 AOPEPQ8N6M6 819 aa16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 ENAHQ8N8S7 591 aaPredicted RBP16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 DPF2Q92785 391 aa16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 GMLQ99445 158 aa16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 FOXP1Q9H334 677 aaPredicted RBP16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 CNOT7Q9UIV1 285 aaKnown RBP16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 KCNJ14Q9UNX9 436 aa16.4■□□□□ 0.22
NIPAL3-203ENST00000358028 BTBD18B2RXH4 712 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 SYKP43405 635 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 GSDMDP57764 484 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 NLRP12P59046 1061 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 TPM4P67936 248 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 EAPPQ56P03 285 aaPredicted RBP16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 CMTR1Q8N1G2 835 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 CERS5Q8N5B7 392 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 AGBL3Q8NEM8 1001 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 CACTINQ8WUQ7 758 aaKnown RBP16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 RNF26Q9BY78 433 aaPredicted RBP16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 IMPACTQ9P2X3 320 aa16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
NIPAL3-203ENST00000358028 USP17L12C9JPN9 530 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 USP17L21D6R901 530 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 EGFRP00533 1210 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 LRMPQ12912 555 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 IFIT1BQ5T764 474 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 CHADLQ6NUI6 762 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 LRRC8AQ8IWT6 810 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 TRPM4Q8TD43 1214 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 ADARB2Q9NS39 739 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 AATFQ9NY61 560 aaKnown RBP eCLIP16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 FAM205AQ6ZU69 1335 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 SMTNL1A8MU46 457 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 ORC4O43929 436 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 PRDM1O75626 825 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 PRDX5P30044 214 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 DPCR1Q3MIW9 517 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 CCDC144BQ3MJ40 725 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 SPTY2D1Q68D10 685 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 SAMD7Q7Z3H4 446 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 CATIPQ7Z7H3 387 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 IQCA1Q86XH1 822 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 CLIC6Q96NY7 704 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 DCP1AQ9NPI6 582 aaPredicted RBP16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 KCND1Q9NSA2 647 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
NIPAL3-203ENST00000358028 MYO3BQ8WXR4 1341 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 DDAH1O94760 285 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 CALM1P0DP23 149 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 CALM2P0DP24 149 aa16.37■□□□□ 0.21
NIPAL3-203ENST00000358028 CALM3P0DP25 149 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms