RNA–Protein interactions for RNA: ENST00000356876.7

TNFRSF25-204, Transcript of TNF receptor superfamily member 25, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF25, Length 1,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-204ENST00000356876 SHROOM1Q2M3G4 852 aaPredicted RBP30■■■□□ 2.39
TNFRSF25-204ENST00000356876 C8orf76Q96K31 380 aa30■■■□□ 2.39
TNFRSF25-204ENST00000356876 PPP2R3BQ9Y5P8 575 aa30■■■□□ 2.39
TNFRSF25-204ENST00000356876 PALM3A6NDB9 673 aaPredicted RBP30■■■□□ 2.39
TNFRSF25-204ENST00000356876 DEXIO95424 95 aa30■■■□□ 2.39
TNFRSF25-204ENST00000356876 BAG4O95429 457 aaKnown RBP30■■■□□ 2.39
TNFRSF25-204ENST00000356876 JAG1P78504 1218 aa30■■■□□ 2.39
TNFRSF25-204ENST00000356876 SRBD1Q8N5C6 995 aaKnown RBP30■■■□□ 2.39
TNFRSF25-204ENST00000356876 ALG1Q9BT22 464 aa30■■■□□ 2.39
TNFRSF25-204ENST00000356876 ATP6V1DQ9Y5K8 247 aa30■■■□□ 2.39
TNFRSF25-204ENST00000356876 PRPF3O43395 683 aaKnown RBP29.99■■■□□ 2.39
TNFRSF25-204ENST00000356876 EEF2P13639 858 aaKnown RBP29.99■■■□□ 2.39
TNFRSF25-204ENST00000356876 ICA1Q05084 483 aa29.99■■■□□ 2.39
TNFRSF25-204ENST00000356876 LRRC47Q8N1G4 583 aaKnown RBP29.99■■■□□ 2.39
TNFRSF25-204ENST00000356876 LZTS2Q9BRK4 669 aa29.99■■■□□ 2.39
TNFRSF25-204ENST00000356876 ATP2B2Q01814 1243 aa29.98■■■□□ 2.39
TNFRSF25-204ENST00000356876 AKAP17AQ02040 695 aaKnown RBP29.98■■■□□ 2.39
TNFRSF25-204ENST00000356876 FBXO18Q8NFZ0 1043 aa29.98■■■□□ 2.39
TNFRSF25-204ENST00000356876 HOOK2Q96ED9 719 aa29.98■■■□□ 2.39
TNFRSF25-204ENST00000356876 PARP1P09874 1014 aaKnown RBP29.97■■■□□ 2.39
TNFRSF25-204ENST00000356876 MCM4P33991 863 aa29.97■■■□□ 2.39
TNFRSF25-204ENST00000356876 SIAH1Q8IUQ4 282 aa29.97■■■□□ 2.39
TNFRSF25-204ENST00000356876 STAG2Q8N3U4 1231 aa29.97■■■□□ 2.39
TNFRSF25-204ENST00000356876 MTMR7Q9Y216 660 aa29.97■■■□□ 2.39
TNFRSF25-204ENST00000356876 SNHG28P0DPA3 235 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 CAP2P40123 477 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 FOSBP53539 338 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 NBPF12Q5TAG4 269 aaPredicted RBP29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 CNTNAP5Q8WYK1 1306 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 USP17L5A8MUK1 530 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 PDHBP11177 359 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 USP50Q70EL3 339 aaPredicted RBP29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 AIFM3Q96NN9 605 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 ZBTB21Q9ULJ3 1066 aa29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 V9GY48 417 aaPredicted RBP29.96■■■□□ 2.39
TNFRSF25-204ENST00000356876 PHF20L1A8MW92 1017 aa29.95■■■□□ 2.38
TNFRSF25-204ENST00000356876 DCAF15Q66K64 600 aa29.95■■■□□ 2.38
TNFRSF25-204ENST00000356876 USP17L2Q6R6M4 530 aa29.95■■■□□ 2.38
TNFRSF25-204ENST00000356876 UBE2Q2LH0YL09 131 aa29.94■■■□□ 2.38
TNFRSF25-204ENST00000356876 FERMT3Q86UX7 667 aa29.94■■■□□ 2.38
TNFRSF25-204ENST00000356876 ZSCAN16Q9H4T2 348 aaPredicted RBP29.94■■■□□ 2.38
TNFRSF25-204ENST00000356876 RBM27Q9P2N5 1060 aaKnown RBP29.94■■■□□ 2.38
TNFRSF25-204ENST00000356876 SYNPO2Q9UMS6 1093 aa29.94■■■□□ 2.38
TNFRSF25-204ENST00000356876 KLRF2D3W0D1 207 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 SMARCA1P28370 1054 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 GUCY1B3Q02153 619 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 ASPRV1Q53RT3 343 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 DCPSQ96C86 337 aaKnown RBP29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 GOLGA8HP0CJ92 632 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 EPHX2P34913 555 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 TRIM29Q14134 588 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 PKN1Q16512 942 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 OTUD7BQ6GQQ9 843 aa29.93■■■□□ 2.38
TNFRSF25-204ENST00000356876 ASNSP08243 561 aa29.92■■■□□ 2.38
TNFRSF25-204ENST00000356876 RESTQ13127 1097 aa29.92■■■□□ 2.38
TNFRSF25-204ENST00000356876 RASGRP2Q7LDG7 609 aa29.92■■■□□ 2.38
TNFRSF25-204ENST00000356876 SPZ1Q9BXG8 430 aa29.92■■■□□ 2.38
TNFRSF25-204ENST00000356876 GINM1Q9NU53 330 aa29.92■■■□□ 2.38
TNFRSF25-204ENST00000356876 IQCA1LA6NCM1 817 aa29.91■■■□□ 2.38
TNFRSF25-204ENST00000356876 KRT40Q6A162 431 aa29.91■■■□□ 2.38
TNFRSF25-204ENST00000356876 ZC3H15Q8WU90 426 aaKnown RBP29.91■■■□□ 2.38
TNFRSF25-204ENST00000356876 ZNF341Q9BYN7 854 aa29.91■■■□□ 2.38
TNFRSF25-204ENST00000356876 GJB4Q9NTQ9 266 aa29.91■■■□□ 2.38
TNFRSF25-204ENST00000356876 DDX11L8A8MPP1 907 aa29.9■■■□□ 2.38
TNFRSF25-204ENST00000356876 GOLGA6L22H0YM25 854 aa29.9■■■□□ 2.38
TNFRSF25-204ENST00000356876 CTNND1O60716 968 aaKnown RBP29.9■■■□□ 2.38
TNFRSF25-204ENST00000356876 GMCL1P1Q8NEA9 526 aa29.9■■■□□ 2.38
TNFRSF25-204ENST00000356876 ARHGEF10LQ9HCE6 1279 aa29.9■■■□□ 2.38
TNFRSF25-204ENST00000356876 ZNF543Q08ER8 600 aa29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 FOXD4L6Q3SYB3 417 aaPredicted RBP29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 SUPT20HL1Q3ZLR7 823 aa29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 GPATCH4Q5T3I0 446 aaKnown RBP29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 PRAMEF18Q5VWM3 479 aa29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 MCTP1Q6DN14 999 aa29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 FOXD4L3Q6VB84 417 aaPredicted RBP29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 DCAF4Q8WV16 495 aa29.89■■■□□ 2.38
TNFRSF25-204ENST00000356876 XBP1P17861 261 aa29.89■■■□□ 2.37
TNFRSF25-204ENST00000356876 SLC35G1Q2M3R5 365 aa29.89■■■□□ 2.37
TNFRSF25-204ENST00000356876 SULF1Q8IWU6 871 aa29.89■■■□□ 2.37
TNFRSF25-204ENST00000356876 CHAMP1Q96JM3 812 aa29.89■■■□□ 2.37
TNFRSF25-204ENST00000356876 ZNF112Q9UJU3 913 aa29.89■■■□□ 2.37
TNFRSF25-204ENST00000356876 hCG_1642624A0A1W2PR95 340 aa29.88■■■□□ 2.37
TNFRSF25-204ENST00000356876 CYTH3O43739 400 aa29.88■■■□□ 2.37
TNFRSF25-204ENST00000356876 NBR1Q14596 966 aa29.88■■■□□ 2.37
TNFRSF25-204ENST00000356876 PFKFB3Q16875 520 aaPredicted RBP29.88■■■□□ 2.37
TNFRSF25-204ENST00000356876 SLFN13Q68D06 897 aa29.88■■■□□ 2.37
TNFRSF25-204ENST00000356876 A0A1W2PRG0 241 aa29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 F5H6K3 240 aa29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 SCG2P13521 617 aa29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 KLRC3Q07444 240 aa29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 TAF1DQ9H5J8 278 aaPredicted RBP29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 TMX2Q9Y320 296 aa29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 FRMPD2Q68DX3 1309 aaPredicted RBP29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 MYH4Q9Y623 1939 aa29.87■■■□□ 2.37
TNFRSF25-204ENST00000356876 RIOX1Q9H6W3 641 aa29.86■■■□□ 2.37
TNFRSF25-204ENST00000356876 POTECB2RU33 542 aa29.85■■■□□ 2.37
TNFRSF25-204ENST00000356876 SLC1A4P43007 532 aa29.85■■■□□ 2.37
TNFRSF25-204ENST00000356876 GMCL1Q96IK5 515 aa29.85■■■□□ 2.37
TNFRSF25-204ENST00000356876 GPCPD1Q9NPB8 672 aa29.85■■■□□ 2.37
TNFRSF25-204ENST00000356876 PTMSP20962 102 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms