RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 FMNL1O95466 1100 aaPredicted RBP21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 EEF2P13639 858 aaKnown RBP21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 STAG2Q8N3U4 1231 aa21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 SLC26A6Q9BXS9 759 aa21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 NYAP2Q9P242 653 aa21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 MAD2L2Q9UI95 211 aa21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 MTMR7Q9Y216 660 aa21.11■□□□□ 0.97
SMARCD3-202ENST00000356800 ZSCAN22P10073 491 aaPredicted RBP21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 CAP2P40123 477 aa21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 USP50Q70EL3 339 aaPredicted RBP21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 SRBD1Q8N5C6 995 aaKnown RBP21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 MKL1Q969V6 931 aa21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 CABP5Q9NP86 173 aa21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 ZBTB21Q9ULJ3 1066 aa21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 PPP2R3BQ9Y5P8 575 aa21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 SSC5DA1L4H1 1573 aa21.1■□□□□ 0.97
SMARCD3-202ENST00000356800 VPS37CA5D8V6 355 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 PALM3A6NDB9 673 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 KIF5BP33176 963 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 FOSBP53539 338 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 ATP2B2Q01814 1243 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 ICA1Q05084 483 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 SSRP1Q08945 709 aaKnown RBP21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 PPP4R3BQ5MIZ7 849 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 CDC37L1Q7L3B6 337 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 AIFM3Q96NN9 605 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 KIF3AQ9Y496 699 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 USP17L5A8MUK1 530 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 BAG4O95429 457 aaKnown RBP21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 SLC35G1Q2M3R5 365 aa21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 TAF1DQ9H5J8 278 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.09■□□□□ 0.97
SMARCD3-202ENST00000356800 CNTNAP5Q8WYK1 1306 aa21.08■□□□□ 0.97
SMARCD3-202ENST00000356800 SNHG28P0DPA3 235 aa21.08■□□□□ 0.96
SMARCD3-202ENST00000356800 PDHBP11177 359 aa21.08■□□□□ 0.96
SMARCD3-202ENST00000356800 USP17L2Q6R6M4 530 aa21.08■□□□□ 0.96
SMARCD3-202ENST00000356800 DLK2Q6UY11 383 aa21.08■□□□□ 0.96
SMARCD3-202ENST00000356800 DOCK1Q14185 1865 aa21.07■□□□□ 0.96
SMARCD3-202ENST00000356800 DDX11L8A8MPP1 907 aa21.07■□□□□ 0.96
SMARCD3-202ENST00000356800 GOLGA8HP0CJ92 632 aa21.07■□□□□ 0.96
SMARCD3-202ENST00000356800 DCPSQ96C86 337 aaKnown RBP21.07■□□□□ 0.96
SMARCD3-202ENST00000356800 RNF26Q9BY78 433 aaPredicted RBP21.07■□□□□ 0.96
SMARCD3-202ENST00000356800 GJB4Q9NTQ9 266 aa21.07■□□□□ 0.96
SMARCD3-202ENST00000356800 TCHHQ07283 1943 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 A0A1W2PRG0 241 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 ADM5C9JUS6 153 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 F13A1P00488 732 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 PARP1P09874 1014 aaKnown RBP21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 TRIM22Q8IYM9 498 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 CHAMP1Q96JM3 812 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 ALG1Q9BT22 464 aa21.06■□□□□ 0.96
SMARCD3-202ENST00000356800 IQCA1LA6NCM1 817 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 PRPF3O43395 683 aaKnown RBP21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 GUCY1B3Q02153 619 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 PKN1Q16512 942 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 DCAF15Q66K64 600 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 OTUD7BQ6GQQ9 843 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 ZNF112Q9UJU3 913 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 FZD1Q9UP38 647 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 V9GY48 417 aaPredicted RBP21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 hCG_1642624A0A1W2PR95 340 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 KLRF2D3W0D1 207 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 H3BQV1 296 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 CYTH3O43739 400 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 DEXIO95424 95 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 GNAQP50148 359 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 IFFO2Q5TF58 517 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 SULF1Q8IWU6 871 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 ACER1Q8TDN7 264 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 ZC3H15Q8WU90 426 aaKnown RBP21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 HOOK2Q96ED9 719 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 C8orf76Q96K31 380 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 ZNF341Q9BYN7 854 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 CPVLQ9H3G5 476 aa21.05■□□□□ 0.96
SMARCD3-202ENST00000356800 INPP5BP32019 993 aa21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 KRT26Q7Z3Y9 468 aa21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 FERMT3Q86UX7 667 aa21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 RGS22Q8NE09 1264 aa21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 FBXO18Q8NFZ0 1043 aa21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 ATP6V1DQ9Y5K8 247 aa21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 FRMPD2Q68DX3 1309 aaPredicted RBP21.04■□□□□ 0.96
SMARCD3-202ENST00000356800 CTNND1O60716 968 aaKnown RBP21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 ASNSP08243 561 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 PTMSP20962 102 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 ECE1P42892 770 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 ZNF543Q08ER8 600 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 ASPRV1Q53RT3 343 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 CCDC84Q86UT8 332 aaPredicted RBP21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 PAPPA2Q9BXP8 1791 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 MYH15Q9Y2K3 1946 aa21.03■□□□□ 0.96
SMARCD3-202ENST00000356800 GOLGA6L22H0YM25 854 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 SUPT20HL1Q3ZLR7 823 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 EAPPQ56P03 285 aaPredicted RBP21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 GMCL1P1Q8NEA9 526 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 WASF1Q92558 559 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 SHISA4Q96DD7 197 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 LZTS2Q9BRK4 669 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 SYNPO2Q9UMS6 1093 aa21.02■□□□□ 0.96
SMARCD3-202ENST00000356800 F5H6K3 240 aa21.02■□□□□ 0.95
SMARCD3-202ENST00000356800 AKAP17AQ02040 695 aaKnown RBP21.02■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms