RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 PANX2Q96RD6 677 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 KCNJ18B7U540 433 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 KRT2P35908 639 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 ARID5AQ03989 594 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 KCNJ12Q14500 433 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 FOXP4Q8IVH2 680 aaPredicted RBP14.06□□□□□ -0.16
BDNF-202ENST00000356660 ANKRD13CQ8N6S4 541 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 SYMPKQ92797 1274 aaKnown RBP14.06□□□□□ -0.16
BDNF-202ENST00000356660 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.06□□□□□ -0.16
BDNF-202ENST00000356660 TRIM10Q9UDY6 481 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 DLG5Q8TDM6 1919 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 TULP2O00295 520 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 PSMA7O14818 248 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 CFAP58Q5T655 872 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 CYB5R4Q7L1T6 521 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 EFCAB13Q8IY85 973 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 TFR2Q9UP52 801 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 GGCXP38435 758 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 CYP27A1Q02318 531 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 MORC3Q14149 939 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 TADA2BQ86TJ2 420 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 CRACR2BQ8N4Y2 399 aaPredicted RBP14.06□□□□□ -0.16
BDNF-202ENST00000356660 YY1AP1Q9H869 796 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 SENP2Q9HC62 589 aa14.06□□□□□ -0.16
BDNF-202ENST00000356660 ADGRL3Q9HAR2 1447 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 USP31Q70CQ4 1352 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 CXCR5P32302 372 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 FXR1P51114 621 aaKnown RBP eCLIP14.05□□□□□ -0.16
BDNF-202ENST00000356660 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 C2orf54Q08AI8 447 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 DDB1Q16531 1140 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 SCLT1Q96NL6 688 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 BMP2KQ9NSY1 1161 aaPredicted RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 ERBB3P21860 1342 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 A0A087WUV0 522 aaPredicted RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 ERCC5P28715 1186 aaPredicted RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 VAV2P52735 878 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 COPB1P53618 953 aaKnown RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 SLC7A5Q01650 507 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 CCDC152Q4G0S7 254 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 PIK3AP1Q6ZUJ8 805 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 RSRC2Q7L4I2 434 aaKnown RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 MB21D2Q8IYB1 491 aaPredicted RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 TRIML1Q8N9V2 468 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 CNNM2Q9H8M5 875 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 UQCRFS1P1P0C7P4 283 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 ZNF76P36508 570 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 SCARF1Q14162 830 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 IFIT1BQ5T764 474 aaKnown RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 RMND1Q9NWS8 449 aa14.05□□□□□ -0.16
BDNF-202ENST00000356660 SEC63Q9UGP8 760 aaKnown RBP14.05□□□□□ -0.16
BDNF-202ENST00000356660 TAF4BQ92750 862 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 CCDC114Q96M63 670 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 UBA5Q9GZZ9 404 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 TAX1BP1Q86VP1 789 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 ARHGEF25Q86VW2 580 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 TBC1D10CQ8IV04 446 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 SEPT11Q9NVA2 429 aaKnown RBP14.04□□□□□ -0.16
BDNF-202ENST00000356660 DLC1Q96QB1 1528 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 COL15A1P39059 1388 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 GUCY1A2P33402 732 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 GUCY2FP51841 1108 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 TICAM2Q86XR7 235 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 RPGRQ92834 1020 aaKnown RBP14.04□□□□□ -0.16
BDNF-202ENST00000356660 CCDC51Q96ER9 411 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 CHP1Q99653 195 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 ZSWIM5Q9P217 1185 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 L1RE1Q9UN81 338 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 PXDNLA1KZ92 1463 aa14.04□□□□□ -0.16
BDNF-202ENST00000356660 KRT31Q15323 416 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 C8orf74Q6P047 294 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 HAUS4Q9H6D7 363 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 ANKZF1Q9H8Y5 726 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 HPS5Q9UPZ3 1129 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 ABCA9Q8IUA7 1624 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 SH2B2O14492 632 aaPredicted RBP14.03□□□□□ -0.16
BDNF-202ENST00000356660 NDUFA10O95299 355 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 ITGA6P23229 1130 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 NF2P35240 595 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 ANTXR2P58335 489 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 TTC38Q5R3I4 469 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 OXER1Q8TDS5 423 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 CEP83Q9Y592 693 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 FAM169AQ9Y6X4 670 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 FRMPD1Q5SYB0 1578 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 LRRIQ3A6PVS8 624 aaPredicted RBP14.03□□□□□ -0.16
BDNF-202ENST00000356660 PTPREP23469 700 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 ASIC1P78348 528 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 CSGALNACT2Q8N6G5 542 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 ESR2Q92731 530 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 C8orf37Q96NL8 207 aa14.03□□□□□ -0.16
BDNF-202ENST00000356660 IFT172Q9UG01 1749 aa14.02□□□□□ -0.16
BDNF-202ENST00000356660 PPFIA1Q13136 1202 aa14.02□□□□□ -0.16
BDNF-202ENST00000356660 FBXW10Q5XX13 1052 aa14.02□□□□□ -0.16
BDNF-202ENST00000356660 TYW1BQ6NUM6 668 aa14.02□□□□□ -0.16
BDNF-202ENST00000356660 CCDC113Q9H0I3 377 aa14.02□□□□□ -0.16
BDNF-202ENST00000356660 CCDC172P0C7W6 258 aa14.02□□□□□ -0.17
BDNF-202ENST00000356660 RFC4P35249 363 aa14.02□□□□□ -0.17
BDNF-202ENST00000356660 LRRC31Q6UY01 552 aa14.02□□□□□ -0.17
BDNF-202ENST00000356660 TMTC2Q8N394 836 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms