RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 MKL1Q969V6 931 aa28.08■■■□□ 2.09
CHKA-202ENST00000356135 CIZ1Q9ULV3 898 aaPredicted RBP28.08■■■□□ 2.09
CHKA-202ENST00000356135 ITGBL1O95965 494 aaPredicted RBP28.07■■■□□ 2.08
CHKA-202ENST00000356135 ATAD5Q96QE3 1844 aa28.07■■■□□ 2.08
CHKA-202ENST00000356135 DDAH1O94760 285 aa28.06■■■□□ 2.08
CHKA-202ENST00000356135 CTDNEP1O95476 244 aa28.06■■■□□ 2.08
CHKA-202ENST00000356135 CMTR1Q8N1G2 835 aaKnown RBP28.06■■■□□ 2.08
CHKA-202ENST00000356135 RAD21O60216 631 aa28.06■■■□□ 2.08
CHKA-202ENST00000356135 IREB2P48200 963 aaKnown RBP28.06■■■□□ 2.08
CHKA-202ENST00000356135 VGLL4Q14135 290 aa28.06■■■□□ 2.08
CHKA-202ENST00000356135 RTN1Q16799 776 aa28.06■■■□□ 2.08
CHKA-202ENST00000356135 USP17L5A8MUK1 530 aa28.05■■■□□ 2.08
CHKA-202ENST00000356135 UBE2Q2LH0YL09 131 aa28.05■■■□□ 2.08
CHKA-202ENST00000356135 PTPRAP18433 802 aa28.05■■■□□ 2.08
CHKA-202ENST00000356135 PPP4R3BQ5MIZ7 849 aa28.05■■■□□ 2.08
CHKA-202ENST00000356135 PICK1Q9NRD5 415 aa28.05■■■□□ 2.08
CHKA-202ENST00000356135 JAK2O60674 1132 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 GOLGA8HP0CJ92 632 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 USP17L2Q6R6M4 530 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 CLMNQ96JQ2 1002 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 ARHGEF10LQ9HCE6 1279 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 SNCAIPQ9Y6H5 919 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 MYH4Q9Y623 1939 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 CALM1P0DP23 149 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 CALM2P0DP24 149 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 CALM3P0DP25 149 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 ZYXQ15942 572 aaKnown RBP28.04■■■□□ 2.08
CHKA-202ENST00000356135 NOL9Q5SY16 702 aaKnown RBP28.04■■■□□ 2.08
CHKA-202ENST00000356135 STAG2Q8N3U4 1231 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 CCDC82Q8N4S0 544 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 GINM1Q9NU53 330 aa28.04■■■□□ 2.08
CHKA-202ENST00000356135 F5H6K3 240 aa28.03■■■□□ 2.08
CHKA-202ENST00000356135 CELF2O95319 508 aaKnown RBP28.03■■■□□ 2.08
CHKA-202ENST00000356135 PDHBP11177 359 aa28.03■■■□□ 2.08
CHKA-202ENST00000356135 KLRC3Q07444 240 aa28.03■■■□□ 2.08
CHKA-202ENST00000356135 MAP3K11Q16584 847 aa28.03■■■□□ 2.08
CHKA-202ENST00000356135 TMX2Q9Y320 296 aa28.03■■■□□ 2.08
CHKA-202ENST00000356135 ZHX2Q9Y6X8 837 aa28.03■■■□□ 2.08
CHKA-202ENST00000356135 DOCK1Q14185 1865 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 PLEKHA8P1O95397 391 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 YY1P25490 414 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 RCAN1P53805 252 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 GRM4Q14833 912 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 KIAA1755Q5JYT7 1200 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 ARMC9Q7Z3E5 817 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 CTCFLQ8NI51 663 aaPredicted RBP28.02■■■□□ 2.08
CHKA-202ENST00000356135 CNKSR2Q8WXI2 1034 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 INTS4Q96HW7 963 aaKnown RBP28.02■■■□□ 2.08
CHKA-202ENST00000356135 MAD2L2Q9UI95 211 aa28.02■■■□□ 2.08
CHKA-202ENST00000356135 NID2Q14112 1375 aa28.01■■■□□ 2.08
CHKA-202ENST00000356135 FRMPD2Q68DX3 1309 aaPredicted RBP28.01■■■□□ 2.08
CHKA-202ENST00000356135 DGKZQ13574 1117 aa28.01■■■□□ 2.08
CHKA-202ENST00000356135 NTRK3Q16288 839 aa28.01■■■□□ 2.08
CHKA-202ENST00000356135 SLFN13Q68D06 897 aa28.01■■■□□ 2.08
CHKA-202ENST00000356135 NSUN7Q8NE18 718 aaKnown RBP28.01■■■□□ 2.08
CHKA-202ENST00000356135 ELP3Q9H9T3 547 aa28.01■■■□□ 2.08
CHKA-202ENST00000356135 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.01■■■□□ 2.08
CHKA-202ENST00000356135 CSADQ9Y600 493 aa28.01■■■□□ 2.08
CHKA-202ENST00000356135 CPLX1O14810 134 aa28.01■■■□□ 2.07
CHKA-202ENST00000356135 CST9Q5W186 159 aa28.01■■■□□ 2.07
CHKA-202ENST00000356135 ANKRD13AQ8IZ07 590 aa28.01■■■□□ 2.07
CHKA-202ENST00000356135 SPICE1Q8N0Z3 855 aa28.01■■■□□ 2.07
CHKA-202ENST00000356135 DDX11Q96FC9 970 aa28.01■■■□□ 2.07
CHKA-202ENST00000356135 ANP32EQ9BTT0 268 aa28.01■■■□□ 2.07
CHKA-202ENST00000356135 CWC22Q9HCG8 908 aaKnown RBP28.01■■■□□ 2.07
CHKA-202ENST00000356135 SPP2Q13103 211 aa28■■■□□ 2.07
CHKA-202ENST00000356135 PHKBQ93100 1093 aa28■■■□□ 2.07
CHKA-202ENST00000356135 NUP88Q99567 741 aaPredicted RBP28■■■□□ 2.07
CHKA-202ENST00000356135 CPVLQ9H3G5 476 aa28■■■□□ 2.07
CHKA-202ENST00000356135 OTOFQ9HC10 1997 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 DHX16O60231 1041 aaKnown RBP27.99■■■□□ 2.07
CHKA-202ENST00000356135 NDUFB10O96000 172 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 SNHG28P0DPA3 235 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 NBPF11Q86T75 865 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 SRBD1Q8N5C6 995 aaKnown RBP27.99■■■□□ 2.07
CHKA-202ENST00000356135 MAP3K14Q99558 947 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 GBA2Q9HCG7 927 aaPredicted RBP27.99■■■□□ 2.07
CHKA-202ENST00000356135 SMC3Q9UQE7 1217 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 PAPPA2Q9BXP8 1791 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 PTPDC1A2A3K4 754 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 PALM3A6NDB9 673 aaPredicted RBP27.99■■■□□ 2.07
CHKA-202ENST00000356135 PARP1P09874 1014 aaKnown RBP27.99■■■□□ 2.07
CHKA-202ENST00000356135 LDLRAD1Q5T700 205 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 KCTD1Q719H9 257 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 GMCL1P1Q8NEA9 526 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 FEZ1Q99689 392 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 GPCPD1Q9NPB8 672 aa27.99■■■□□ 2.07
CHKA-202ENST00000356135 RBM28Q9NW13 759 aaKnown RBP27.99■■■□□ 2.07
CHKA-202ENST00000356135 TRIM75PA6NK02 468 aa27.98■■■□□ 2.07
CHKA-202ENST00000356135 GJB2P29033 226 aa27.98■■■□□ 2.07
CHKA-202ENST00000356135 ZNF280CQ8ND82 737 aa27.98■■■□□ 2.07
CHKA-202ENST00000356135 SMARCC2Q8TAQ2 1214 aa27.98■■■□□ 2.07
CHKA-202ENST00000356135 CCDC196A0A1B0GTZ2 297 aa27.97■■■□□ 2.07
CHKA-202ENST00000356135 KIF5BP33176 963 aa27.97■■■□□ 2.07
CHKA-202ENST00000356135 MTMR2Q13614 643 aa27.97■■■□□ 2.07
CHKA-202ENST00000356135 TTBK2Q6IQ55 1244 aa27.97■■■□□ 2.07
CHKA-202ENST00000356135 TMTC3Q6ZXV5 915 aa27.97■■■□□ 2.07
CHKA-202ENST00000356135 LLPHQ9BRT6 129 aaKnown RBP27.97■■■□□ 2.07
CHKA-202ENST00000356135 WDR18Q9BV38 432 aa27.97■■■□□ 2.07
CHKA-202ENST00000356135 UBA5Q9GZZ9 404 aa27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms