RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 SCAF8Q9UPN6 1271 aaKnown RBP15.81■□□□□ 0.12
HOXA1-202ENST00000355633 CNTNAP5Q8WYK1 1306 aa15.81■□□□□ 0.12
HOXA1-202ENST00000355633 UBE2Q2LH0YL09 131 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 PRPF3O43395 683 aaKnown RBP15.8■□□□□ 0.12
HOXA1-202ENST00000355633 PTMSP20962 102 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 LMOD1P29536 600 aaPredicted RBP15.8■□□□□ 0.12
HOXA1-202ENST00000355633 GUCY1A2P33402 732 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 RESTQ13127 1097 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 TRIM29Q14134 588 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 SHROOM1Q2M3G4 852 aaPredicted RBP15.8■□□□□ 0.12
HOXA1-202ENST00000355633 OTUD7BQ6GQQ9 843 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 STAG2Q8N3U4 1231 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 CABP5Q9NP86 173 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 GJB4Q9NTQ9 266 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 ATP2B2Q01814 1243 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 SEPT2Q15019 361 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 TCHHQ07283 1943 aa15.8■□□□□ 0.12
HOXA1-202ENST00000355633 PALM3A6NDB9 673 aaPredicted RBP15.79■□□□□ 0.12
HOXA1-202ENST00000355633 GRIN3BO60391 1043 aa15.79■□□□□ 0.12
HOXA1-202ENST00000355633 GH2P01242 217 aa15.79■□□□□ 0.12
HOXA1-202ENST00000355633 PARP1P09874 1014 aaKnown RBP15.79■□□□□ 0.12
HOXA1-202ENST00000355633 RRP1BQ14684 758 aaKnown RBP15.79■□□□□ 0.12
HOXA1-202ENST00000355633 MIGA2Q7L4E1 593 aa15.79■□□□□ 0.12
HOXA1-202ENST00000355633 APOBEC3FQ8IUX4 373 aaKnown RBP15.79■□□□□ 0.12
HOXA1-202ENST00000355633 TEPSINQ96N21 525 aa15.79■□□□□ 0.12
HOXA1-202ENST00000355633 NYAP2Q9P242 653 aa15.79■□□□□ 0.12
HOXA1-202ENST00000355633 V9GY48 417 aaPredicted RBP15.79■□□□□ 0.12
HOXA1-202ENST00000355633 PDHBP11177 359 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 ICA1Q05084 483 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 DNM1Q05193 864 aaKnown RBP15.78■□□□□ 0.12
HOXA1-202ENST00000355633 ANGEL2Q5VTE6 544 aaKnown RBP15.78■□□□□ 0.12
HOXA1-202ENST00000355633 KRT40Q6A162 431 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 DPY19L2Q6NUT2 758 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 LZTS2Q9BRK4 669 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 DEFB129Q9H1M3 183 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 EEF2P13639 858 aaKnown RBP15.78■□□□□ 0.12
HOXA1-202ENST00000355633 NCLP19338 710 aaKnown RBP15.78■□□□□ 0.12
HOXA1-202ENST00000355633 MAP3K10Q02779 954 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 PKN1Q16512 942 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 FAM173BQ6P4H8 233 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 USP17L2Q6R6M4 530 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 RASGRP2Q7LDG7 609 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 GGA3Q9NZ52 723 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 RBM27Q9P2N5 1060 aaKnown RBP15.78■□□□□ 0.12
HOXA1-202ENST00000355633 UTRNP46939 3433 aa15.78■□□□□ 0.12
HOXA1-202ENST00000355633 hCG_1642624A0A1W2PR95 340 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 USP17L5A8MUK1 530 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 KLRF2D3W0D1 207 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 GOLGA8HP0CJ92 632 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 HIRAP54198 1017 aaPredicted RBP15.77■□□□□ 0.12
HOXA1-202ENST00000355633 JAG1P78504 1218 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 MKL1Q969V6 931 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 ADARB2Q9NS39 739 aaKnown RBP15.77■□□□□ 0.12
HOXA1-202ENST00000355633 CNPY2Q9Y2B0 182 aa15.77■□□□□ 0.12
HOXA1-202ENST00000355633 MYH15Q9Y2K3 1946 aa15.77■□□□□ 0.11
HOXA1-202ENST00000355633 PRPF40AO75400 957 aaKnown RBP15.77■□□□□ 0.11
HOXA1-202ENST00000355633 SNHG28P0DPA3 235 aa15.77■□□□□ 0.11
HOXA1-202ENST00000355633 XBP1P17861 261 aa15.77■□□□□ 0.11
HOXA1-202ENST00000355633 KRT85P78386 507 aa15.77■□□□□ 0.11
HOXA1-202ENST00000355633 ASPRV1Q53RT3 343 aa15.77■□□□□ 0.11
HOXA1-202ENST00000355633 KIF23Q02241 960 aaPredicted RBP15.76■□□□□ 0.11
HOXA1-202ENST00000355633 SIAH1Q8IUQ4 282 aa15.76■□□□□ 0.11
HOXA1-202ENST00000355633 GDPD2Q9HCC8 539 aa15.76■□□□□ 0.11
HOXA1-202ENST00000355633 LMBRD1Q9NUN5 540 aa15.76■□□□□ 0.11
HOXA1-202ENST00000355633 ZBTB21Q9ULJ3 1066 aa15.76■□□□□ 0.11
HOXA1-202ENST00000355633 ZC3H4Q9UPT8 1303 aaKnown RBP15.76■□□□□ 0.11
HOXA1-202ENST00000355633 CAP2P40123 477 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 PIBF1Q8WXW3 757 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 SPZ1Q9BXG8 430 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 FRMPD2Q68DX3 1309 aaPredicted RBP15.75■□□□□ 0.11
HOXA1-202ENST00000355633 BAZ2BQ9UIF8 2168 aaKnown RBP15.75■□□□□ 0.11
HOXA1-202ENST00000355633 FIBPO43427 364 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 CYTH3O43739 400 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 MMP1P03956 469 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 SCG2P13521 617 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 SMARCA1P28370 1054 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 PFKFB3Q16875 520 aaPredicted RBP15.75■□□□□ 0.11
HOXA1-202ENST00000355633 CSPP1Q1MSJ5 1256 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 BRAPQ7Z569 592 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 KCNJ14Q9UNX9 436 aa15.75■□□□□ 0.11
HOXA1-202ENST00000355633 TRAK2O60296 914 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 ZNF543Q08ER8 600 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 GNL2Q13823 731 aaKnown RBP15.74■□□□□ 0.11
HOXA1-202ENST00000355633 SAFBQ15424 915 aaKnown RBP eCLIP15.74■□□□□ 0.11
HOXA1-202ENST00000355633 SLC35G1Q2M3R5 365 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 NBPF12Q5TAG4 269 aaPredicted RBP15.74■□□□□ 0.11
HOXA1-202ENST00000355633 USP48Q86UV5 1035 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 TMEM87AQ8NBN3 555 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 HOOK2Q96ED9 719 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 L3MBTL3Q96JM7 780 aaPredicted RBP15.74■□□□□ 0.11
HOXA1-202ENST00000355633 ARHGEF10LQ9HCE6 1279 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 VPS54Q9P1Q0 977 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 PPP2R3BQ9Y5P8 575 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 PITPNM2Q9BZ72 1349 aa15.74■□□□□ 0.11
HOXA1-202ENST00000355633 PHF20L1A8MW92 1017 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 KIF28PB7ZC32 967 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 RAD21O60216 631 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 CCDC96Q2M329 555 aa15.73■□□□□ 0.11
HOXA1-202ENST00000355633 SKOR2Q2VWA4 1001 aaPredicted RBP15.73■□□□□ 0.11
HOXA1-202ENST00000355633 GPATCH4Q5T3I0 446 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms