RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 EEF2P13639 858 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 PDE1AP54750 535 aa20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 UBXN2AP68543 259 aa20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 MORN1Q5T089 497 aa20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 LBX2Q6XYB7 198 aa20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 U2AF1L4Q8WU68 220 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 FSD1Q9BTV5 496 aa20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 STAP2Q9UGK3 403 aa20.07■□□□□ 0.8
PDLIM7-201ENST00000355572 ERC2O15083 957 aa20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 SMC5Q8IY18 1101 aa20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 IFNL3Q8IZI9 196 aa20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 LNPKQ9C0E8 428 aa20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 PAK6Q9NQU5 681 aaPredicted RBP20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 RABGAP1Q9Y3P9 1069 aa20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 ZNF236Q9UL36 1845 aa20.06■□□□□ 0.8
PDLIM7-201ENST00000355572 PRDM1O75626 825 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 ZFYP08048 801 aaPredicted RBP20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 GCC1Q96CN9 775 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 CCDC17Q96LX7 622 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 DEFB118Q96PH6 123 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 VCPKMTQ9H867 229 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 FBXO28Q9NVF7 368 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 PLXNA1Q9UIW2 1896 aa20.05■□□□□ 0.8
PDLIM7-201ENST00000355572 SGPL1O95470 568 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 VPS53Q5VIR6 699 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 B4GALNT3Q6L9W6 998 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 GIMAP6Q6P9H5 292 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 ATG4CQ96DT6 458 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 TANGO6Q9C0B7 1094 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 INCENPQ9NQS7 918 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 FLRT1Q9NZU1 646 aa20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
PDLIM7-201ENST00000355572 IGKV6D-41A0A0C4DH26 115 aa20.03■□□□□ 0.8
PDLIM7-201ENST00000355572 PATL2C9JE40 543 aaKnown RBP20.03■□□□□ 0.8
PDLIM7-201ENST00000355572 HMGCRP04035 888 aa20.03■□□□□ 0.8
PDLIM7-201ENST00000355572 ATP2B2Q01814 1243 aa20.03■□□□□ 0.8
PDLIM7-201ENST00000355572 PLEKHH3Q7Z736 793 aa20.03■□□□□ 0.8
PDLIM7-201ENST00000355572 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.03■□□□□ 0.88e-9■■■■□ 19.6
PDLIM7-201ENST00000355572 ARHGEF10LQ9HCE6 1279 aa20.03■□□□□ 0.8
PDLIM7-201ENST00000355572 MAPK4P31152 587 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 DSG3P32926 999 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 TDO2P48775 406 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 MAP3K21Q5TCX8 1036 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 NPLOC4Q8TAT6 608 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 DIS3LQ8TF46 1054 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 GTF3C2Q8WUA4 911 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 DDRGK1Q96HY6 314 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 FAM227BQ96M60 508 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 NUP88Q99567 741 aaPredicted RBP20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 NUDT12Q9BQG2 462 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 MOV10L1Q9BXT6 1211 aaKnown RBP20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 CRISPLD2Q9H0B8 497 aa20.02■□□□□ 0.8
PDLIM7-201ENST00000355572 A0A0D9SFI3 127 aa20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 APPP05067 770 aa20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 MNX1P50219 401 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 IRX6P78412 446 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 COG2Q14746 738 aa20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 SAMD1Q6SPF0 538 aaPredicted RBP20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 AMOTL1Q8IY63 956 aa20.01■□□□□ 0.79
PDLIM7-201ENST00000355572 PTPREP23469 700 aa20■□□□□ 0.79
PDLIM7-201ENST00000355572 CCND3P30281 292 aaPredicted RBP20■□□□□ 0.79
PDLIM7-201ENST00000355572 CACNB2Q08289 660 aaPredicted RBP20■□□□□ 0.79
PDLIM7-201ENST00000355572 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
PDLIM7-201ENST00000355572 NKX2-3Q8TAU0 364 aa20■□□□□ 0.79
PDLIM7-201ENST00000355572 KANSL2Q9H9L4 492 aa20■□□□□ 0.79
PDLIM7-201ENST00000355572 FLOT1O75955 427 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 IGHA2P01877 340 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 XRCC5P13010 732 aaKnown RBP19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 GNAT2P19087 354 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 CTDSPL2Q05D32 466 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 MAP2K5Q13163 448 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 FAM83BQ5T0W9 1011 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 WDR78Q5VTH9 848 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 ZNF589Q86UQ0 364 aaPredicted RBP19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 SOCS4Q8WXH5 440 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 LPAR1Q92633 364 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 PCDH10Q9P2E7 1040 aa19.99■□□□□ 0.79
PDLIM7-201ENST00000355572 SMCHD1A6NHR9 2005 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 LAMA4Q16363 1823 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 WDR46O15213 610 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 FARP2O94887 1054 aaPredicted RBP19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 PRKAR2AP13861 404 aaKnown RBP19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 PPARAQ07869 468 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 GRB14Q14449 540 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 TMEM132BQ14DG7 1078 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 FAM47AQ5JRC9 791 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 REPS2Q8NFH8 660 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 EVI5LQ96CN4 794 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 CEP95Q96GE4 821 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 APBA2Q99767 749 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 SPATC1LQ9H0A9 340 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 MKNK2Q9HBH9 465 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 ADAMTS5Q9UNA0 930 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 RPTORQ8N122 1335 aa19.98■□□□□ 0.79
PDLIM7-201ENST00000355572 ERCC3P19447 782 aa19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 RGS2P41220 211 aa19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 NUCB1Q02818 461 aa19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 NMIQ13287 307 aaPredicted RBP19.97■□□□□ 0.79
PDLIM7-201ENST00000355572 RASGRP2Q7LDG7 609 aa19.97■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms