RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SMIM24O75264 130 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 SEC24BO95487 1268 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
LMX1B-201ENST00000355497 USH1GQ495M9 461 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 TRIM68Q6AZZ1 485 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 C2CD5Q86YS7 1000 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 IVNS1ABPQ9Y6Y0 642 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 PPFIA2O75334 1257 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 TNNI1P19237 187 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 LRMPQ12912 555 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 TRMT44Q8IYL2 757 aaKnown RBP16.4■□□□□ 0.22
LMX1B-201ENST00000355497 GJA3Q9Y6H8 435 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 HIP1RO75146 1068 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 SLC1A4P43007 532 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 PLBD2Q8NHP8 589 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 RIPOR2Q9Y4F9 1068 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 ZFYVE9O95405 1425 aa16.4■□□□□ 0.22
LMX1B-201ENST00000355497 ADCY8P40145 1251 aa16.39■□□□□ 0.22
LMX1B-201ENST00000355497 TIMM10P62072 90 aa16.39■□□□□ 0.22
LMX1B-201ENST00000355497 PNOCQ13519 176 aa16.39■□□□□ 0.22
LMX1B-201ENST00000355497 CNBD1Q8NA66 436 aa16.39■□□□□ 0.22
LMX1B-201ENST00000355497 NT5C3AQ9H0P0 336 aa16.39■□□□□ 0.22
LMX1B-201ENST00000355497 HYOU1Q9Y4L1 999 aa16.39■□□□□ 0.22
LMX1B-201ENST00000355497 KDM3AQ9Y4C1 1321 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 DENND4BO75064 1496 aaPredicted RBP16.39■□□□□ 0.21
LMX1B-201ENST00000355497 STAM2O75886 525 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 BAG2O95816 211 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 KRT24Q2M2I5 525 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 TRAPPC3LQ5T215 181 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 EFCC1Q9HA90 598 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 KCNG1Q9UIX4 513 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 GGA1Q9UJY5 639 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 KRIT1O00522 736 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 PRDM1O75626 825 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 PARP10Q53GL7 1025 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 PHKBQ93100 1093 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 NLRC4Q9NPP4 1024 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 AATFQ9NY61 560 aaKnown RBP eCLIP16.39■□□□□ 0.21
LMX1B-201ENST00000355497 TRPC6Q9Y210 931 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 FAM173BQ6P4H8 233 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 MIER3Q7Z3K6 550 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 TRIM50Q86XT4 487 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 GDAP1L1Q96MZ0 367 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 MYL10Q9BUA6 226 aa16.39■□□□□ 0.21
LMX1B-201ENST00000355497 INPP1P49441 399 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 PPP2R5EQ16537 467 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 ZSCAN26Q16670 478 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 CDC37L1Q7L3B6 337 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 MICAL1Q8TDZ2 1067 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 DNMBPQ6XZF7 1577 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 KCNK3O14649 394 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 GADD45BO75293 160 aaPredicted RBP16.38■□□□□ 0.21
LMX1B-201ENST00000355497 MUM1L1Q5H9M0 696 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 DBNDD2Q9BQY9 259 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 KCNJ14Q9UNX9 436 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 IBTKQ9P2D0 1353 aaPredicted RBP16.38■□□□□ 0.21
LMX1B-201ENST00000355497 ADKP55263 362 aaKnown RBP16.38■□□□□ 0.21
LMX1B-201ENST00000355497 COG7P83436 770 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 LRRC43Q8N309 656 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 TEKT1Q969V4 418 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 SCYL1Q96KG9 808 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 METTL22Q9BUU2 404 aaPredicted RBP16.38■□□□□ 0.21
LMX1B-201ENST00000355497 STAT1P42224 750 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 PLCB4Q15147 1175 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 HADHQ16836 314 aaKnown RBP16.38■□□□□ 0.21
LMX1B-201ENST00000355497 FAM227BQ96M60 508 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 SERTAD1Q9UHV2 236 aa16.38■□□□□ 0.21
LMX1B-201ENST00000355497 KCNJ18B7U540 433 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 GNPATO15228 680 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 PDE8AO60658 829 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 KCNJ12Q14500 433 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 HAUS1Q96CS2 278 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 FAM89AQ96GI7 184 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 CD2APQ9Y5K6 639 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 OTUD6AQ7L8S5 288 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 TRIM56Q9BRZ2 755 aaKnown RBP16.37■□□□□ 0.21
LMX1B-201ENST00000355497 XPO4Q9C0E2 1151 aaKnown RBP16.37■□□□□ 0.21
LMX1B-201ENST00000355497 RRAGDQ9NQL2 400 aaPredicted RBP16.37■□□□□ 0.21
LMX1B-201ENST00000355497 ZBTB7BO15156 539 aaPredicted RBP16.37■□□□□ 0.21
LMX1B-201ENST00000355497 GCKP35557 465 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 JADE1Q6IE81 842 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 MED10Q9BTT4 135 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 LPXNO60711 386 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 SDCCAG3Q96C92 435 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 HOOK2Q96ED9 719 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 PLB1Q6P1J6 1458 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 SLC8A1P32418 973 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 YARSP54577 528 aaKnown RBP16.37■□□□□ 0.21
LMX1B-201ENST00000355497 HACE1Q8IYU2 909 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 UIMC1Q96RL1 719 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 CAPS2Q9BXY5 557 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 TYW1Q9NV66 732 aaKnown RBP16.37■□□□□ 0.21
LMX1B-201ENST00000355497 PARD3Q8TEW0 1356 aa16.37■□□□□ 0.21
LMX1B-201ENST00000355497 XRCC5P13010 732 aaKnown RBP16.36■□□□□ 0.21
LMX1B-201ENST00000355497 ARHGAP4P98171 946 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 IWS1Q96ST2 819 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 SEPT10Q9P0V9 454 aa16.36■□□□□ 0.21
LMX1B-201ENST00000355497 IFNB1P01574 187 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms