RNA–Protein interactions for RNA: ENST00000355360.8

PGBD2-202, Transcript of piggyBac transposable element derived 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PGBD2, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD2-202ENST00000355360 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 CARD6Q9BX69 1037 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 CEP131Q9UPN4 1083 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 CTNND2Q9UQB3 1225 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16■□□□□ 0.151e-6■■□□□ 13.6
PGBD2-202ENST00000355360 CUL4BQ13620 913 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 SPECC1LQ69YQ0 1117 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 TYW1BQ6NUM6 668 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 MLKLQ8NB16 471 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 ENOX1Q8TC92 643 aaKnown RBP16■□□□□ 0.15
PGBD2-202ENST00000355360 TNFRSF25Q93038 417 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 PKNOX2Q96KN3 472 aa16■□□□□ 0.15
PGBD2-202ENST00000355360 SAP30BPQ9UHR5 308 aaKnown RBP16■□□□□ 0.15
PGBD2-202ENST00000355360 MYH8P13535 1937 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 TFRCP02786 760 aaKnown RBP15.99■□□□□ 0.15
PGBD2-202ENST00000355360 GOLGA8HP0CJ92 632 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 PLCD1P51178 756 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 TBX2Q13207 712 aaPredicted RBP15.99■□□□□ 0.15
PGBD2-202ENST00000355360 CCDC93Q567U6 631 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 RCSD1Q6JBY9 416 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 SETDB2Q96T68 719 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 ZSWIM4Q9H7M6 989 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 KCND1Q9NSA2 647 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 DDX41Q9UJV9 622 aaKnown RBP15.99■□□□□ 0.15
PGBD2-202ENST00000355360 XDHP47989 1333 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 GNG11P61952 73 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 NFIXQ14938 502 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 ARHGAP29Q52LW3 1261 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 ZNF579Q8NAF0 562 aaKnown RBP15.99■□□□□ 0.15
PGBD2-202ENST00000355360 C8orf37Q96NL8 207 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 NLRP3Q96P20 1036 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 DNAJC5Q9H3Z4 198 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 MRPL44Q9H9J2 332 aaKnown RBP15.99■□□□□ 0.15
PGBD2-202ENST00000355360 L2HGDHQ9H9P8 463 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 LZTFL1Q9NQ48 299 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.99■□□□□ 0.15
PGBD2-202ENST00000355360 SYNRGQ9UMZ2 1314 aa15.99■□□□□ 0.15
PGBD2-202ENST00000355360 TFAP4Q01664 338 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 SYCP1Q15431 976 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 APTXQ7Z2E3 356 aaKnown RBP15.98■□□□□ 0.15
PGBD2-202ENST00000355360 ZNF397Q8NF99 534 aaPredicted RBP15.98■□□□□ 0.15
PGBD2-202ENST00000355360 LAMB2P55268 1798 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 SCN7AQ01118 1682 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 ABL1P00519 1130 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 SLFN14P0C7P3 912 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 RBL2Q08999 1139 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 CRNKL1Q9BZJ0 848 aaKnown RBP15.98■□□□□ 0.15
PGBD2-202ENST00000355360 IL17RBQ9NRM6 502 aa15.98■□□□□ 0.15
PGBD2-202ENST00000355360 SCG2P13521 617 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 NR1I3Q14994 352 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 CLEC4GQ6UXB4 293 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 DZIP1Q86YF9 867 aaKnown RBP15.97■□□□□ 0.15
PGBD2-202ENST00000355360 SPATA20Q8TB22 786 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 SH3RF3Q8TEJ3 882 aaPredicted RBP15.97■□□□□ 0.15
PGBD2-202ENST00000355360 SLC35G1Q2M3R5 365 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 CDCA7Q9BWT1 371 aaPredicted RBP15.97■□□□□ 0.15
PGBD2-202ENST00000355360 VPS16Q9H269 839 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 ANKIB1Q9P2G1 1089 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 GDAQ9Y2T3 454 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 PARP3Q9Y6F1 533 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 PPP1R3GB7ZBB8 358 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 RNF225M0QZC1 329 aaPredicted RBP15.97■□□□□ 0.15
PGBD2-202ENST00000355360 SEC31AO94979 1220 aaKnown RBP15.97■□□□□ 0.15
PGBD2-202ENST00000355360 RGS22Q8NE09 1264 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 OGFRQ9NZT2 677 aa15.97■□□□□ 0.15
PGBD2-202ENST00000355360 ARHGAP6O43182 974 aa15.96■□□□□ 0.15
PGBD2-202ENST00000355360 USP5P45974 858 aa15.96■□□□□ 0.15
PGBD2-202ENST00000355360 RAD9BQ6WBX8 426 aa15.96■□□□□ 0.15
PGBD2-202ENST00000355360 IGSF22Q8N9C0 903 aa15.96■□□□□ 0.15
PGBD2-202ENST00000355360 TRIM49BA6NDI0 452 aa15.96■□□□□ 0.14
PGBD2-202ENST00000355360 KIF2AO00139 706 aaPredicted RBP15.96■□□□□ 0.14
PGBD2-202ENST00000355360 CLCN6P51797 869 aa15.96■□□□□ 0.14
PGBD2-202ENST00000355360 RRAGBQ5VZM2 374 aa15.96■□□□□ 0.14
PGBD2-202ENST00000355360 TGFBRAP1Q8WUH2 860 aa15.96■□□□□ 0.14
PGBD2-202ENST00000355360 BRMS1Q9HCU9 246 aa15.96■□□□□ 0.14
PGBD2-202ENST00000355360 RBM28Q9NW13 759 aaKnown RBP15.96■□□□□ 0.14
PGBD2-202ENST00000355360 STX8Q9UNK0 236 aa15.96■□□□□ 0.14
PGBD2-202ENST00000355360 THRAP3Q9Y2W1 955 aaKnown RBP15.96■□□□□ 0.14
PGBD2-202ENST00000355360 NRAPQ86VF7 1730 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 ZPR1O75312 459 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 CASP14P31944 242 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 ATP2C1P98194 919 aaPredicted RBP15.95■□□□□ 0.14
PGBD2-202ENST00000355360 DMTNQ08495 405 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 SH3RF1Q7Z6J0 888 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 MAPKAPK5Q8IW41 473 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 SMARCC1Q92922 1105 aaPredicted RBP15.95■□□□□ 0.14
PGBD2-202ENST00000355360 SRCAPQ6ZRS2 3230 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 A0A1B0GTH6 734 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 FXR1P51114 621 aaKnown RBP eCLIP15.95■□□□□ 0.14
PGBD2-202ENST00000355360 PNMA1Q8ND90 353 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 DACH1Q9UI36 760 aa15.95■□□□□ 0.14
PGBD2-202ENST00000355360 COL5A3P25940 1745 aaPredicted RBP15.94■□□□□ 0.14
PGBD2-202ENST00000355360 FGRP09769 529 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 MNS1Q8NEH6 495 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 TMEM60Q9H2L4 133 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 TAB2Q9NYJ8 693 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 DDAH1O94760 285 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 TM4SF1P30408 202 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 RCAN1P53805 252 aa15.94■□□□□ 0.14
PGBD2-202ENST00000355360 SPATA1Q5VX52 437 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms