RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 FAM47CQ5HY64 1035 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 OTUD6AQ7L8S5 288 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 RNF169Q8NCN4 708 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 TBC1D31Q96DN5 1066 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 FLOT1O75955 427 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 C2CD5Q86YS7 1000 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 CCDC125Q86Z20 511 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 PLEKHA4Q9H4M7 779 aa14.64□□□□□ -0.07
SCN8A-202ENST00000355133 GIGYF1O75420 1035 aaPredicted RBP14.63□□□□□ -0.07
SCN8A-202ENST00000355133 FYB2Q5VWT5 728 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 LSM14BQ9BX40 385 aaKnown RBP14.63□□□□□ -0.07
SCN8A-202ENST00000355133 ATP8A2Q9NTI2 1148 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 TRPC6Q9Y210 931 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 A0A0D9SFI3 127 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 CCDC105Q8IYK2 499 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 AFAP1L1Q8TED9 768 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 CARD10Q9BWT7 1032 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 NT5C3AQ9H0P0 336 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 PSTPIP2Q9H939 334 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 AS3MTQ9HBK9 375 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 CIB2O75838 187 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 PTH1RQ03431 593 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 LRRC24Q50LG9 513 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 CFAP57Q96MR6 1250 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 ST7Q9NRC1 585 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 ARHGEF12Q9NZN5 1544 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 PEX26Q7Z412 305 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 CCDC110Q8TBZ0 833 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 NSMCE1Q8WV22 266 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 RABEP2Q9H5N1 569 aa14.63□□□□□ -0.07
SCN8A-202ENST00000355133 ATP10AO60312 1499 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 ZWINTO95229 277 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 GADL1Q6ZQY3 521 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 BLIDQ8IZY5 108 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 GPKOWQ92917 476 aaPredicted RBP eCLIP14.62□□□□□ -0.07
SCN8A-202ENST00000355133 BTDP43251 543 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 RPS6KA1Q15418 735 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 YARSP54577 528 aaKnown RBP14.62□□□□□ -0.07
SCN8A-202ENST00000355133 IL17REQ8NFR9 667 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 U2AF1L4Q8WU68 220 aaKnown RBP14.62□□□□□ -0.07
SCN8A-202ENST00000355133 SHANK2Q9UPX8 1470 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 KDRP35968 1356 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 TNFAIP1Q13829 316 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 GNPTABQ3T906 1256 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 BSPRYQ5W0U4 402 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 STMN2Q93045 179 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 RIOK1Q9BRS2 568 aaKnown RBP14.62□□□□□ -0.07
SCN8A-202ENST00000355133 WDR62O43379 1518 aa14.62□□□□□ -0.07
SCN8A-202ENST00000355133 PDE6AP16499 860 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 GPR162Q16538 588 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 CERKLQ49MI3 558 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 CCDC94Q9BW85 323 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 MAST1Q9Y2H9 1570 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 KDM3AQ9Y4C1 1321 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 ATP2B4P23634 1241 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 CHRNDQ07001 517 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 MYSM1Q5VVJ2 828 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 SYCE1Q8N0S2 351 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 ZBTB38Q8NAP3 1195 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 FAM184BQ9ULE4 1060 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 LACTBP83111 547 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 IMPACTQ9P2X3 320 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 ADKP55263 362 aaKnown RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 EAF2Q96CJ1 260 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 MED10Q9BTT4 135 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 USP44Q9H0E7 712 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 THRAP3Q9Y2W1 955 aaKnown RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 ZMYM4Q5VZL5 1548 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 POLR2MP0CAP2 368 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 PFKFB1P16118 471 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 GTF2A1P52655 376 aaPredicted RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 TUBB2AQ13885 445 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 CEP85LQ5SZL2 805 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 PNMA1Q8ND90 353 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 TUBB2BQ9BVA1 445 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 MKRN1Q9UHC7 482 aaKnown RBP14.61□□□□□ -0.07
SCN8A-202ENST00000355133 CTTNBP2Q8WZ74 1663 aa14.61□□□□□ -0.07
SCN8A-202ENST00000355133 GIPC1O14908 333 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 LPXNO60711 386 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 P4HA1P13674 534 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 SF3A3Q12874 501 aaKnown RBP eCLIP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 XKR9Q5GH70 373 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 ARHGAP27Q6ZUM4 889 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 CCDC89Q8N998 374 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 OGFRQ9NZT2 677 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 TNKSO95271 1327 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 RIOK3O14730 519 aaKnown RBP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 NOL3O60936 208 aaKnown RBP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 ABCB4P21439 1286 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 USPL1Q5W0Q7 1092 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 CCDC84Q86UT8 332 aaPredicted RBP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 GABPB2Q8TAK5 448 aaPredicted RBP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 IFIH1Q9BYX4 1025 aaKnown RBP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 ARHGAP6O43182 974 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 ADD1P35611 737 aaKnown RBP14.6□□□□□ -0.07
SCN8A-202ENST00000355133 HHATQ5VTY9 493 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 NOSTRINQ8IVI9 506 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 KLRF2D3W0D1 207 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 CNGA1P29973 690 aa14.6□□□□□ -0.07
SCN8A-202ENST00000355133 ELF2Q15723 593 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms