RNA–Protein interactions for RNA: ENST00000353507.9

DDX4-201, Transcript of DEAD-box helicase 4, humanhuman

TSL 1 (best) BASIC

Gene DDX4, Length 2,778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4-201ENST00000353507 MYH13Q9UKX3 1938 aa13.76□□□□□ -0.21
DDX4-201ENST00000353507 KIF5CO60282 957 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 MFAP3LO75121 409 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 TROAPQ12815 778 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 PTGDRQ13258 359 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 CDKAL1Q5VV42 579 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 TAF3Q5VWG9 929 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 APTXQ7Z2E3 356 aaKnown RBP13.75□□□□□ -0.21
DDX4-201ENST00000353507 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 EPC1Q9H2F5 836 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 CNTNAP5Q8WYK1 1306 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 COL1A1P02452 1464 aaPredicted RBP13.75□□□□□ -0.21
DDX4-201ENST00000353507 CCDC66A2RUB6 948 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 WNT7AO00755 349 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 PLA2G4AP47712 749 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 UBE4AQ14139 1066 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 IQUBQ8NA54 791 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 STAMQ92783 540 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 ACSBG1Q96GR2 724 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 PYM1Q9BRP8 204 aaKnown RBP13.75□□□□□ -0.21
DDX4-201ENST00000353507 ADGRG1Q9Y653 693 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 A0A1B0GUL6 1792 aa13.75□□□□□ -0.21
DDX4-201ENST00000353507 LOC102724428A0A0B4J2F2 783 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 ATP8B1O43520 1251 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 CCT6AP40227 531 aaKnown RBP13.74□□□□□ -0.21
DDX4-201ENST00000353507 SIK1P57059 783 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 NLRP5P59047 1200 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 ATP2C1P98194 919 aaPredicted RBP13.74□□□□□ -0.21
DDX4-201ENST00000353507 RAD9BQ6WBX8 426 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 ANKRD20A12PQ8NF67 263 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 RABGGTAQ92696 567 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 MYH14Q7Z406 1995 aaKnown RBP13.74□□□□□ -0.21
DDX4-201ENST00000353507 PPP1R3GB7ZBB8 358 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 CASP14P31944 242 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 NOM1Q5C9Z4 860 aaKnown RBP13.74□□□□□ -0.21
DDX4-201ENST00000353507 RRAGBQ5VZM2 374 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 PIK3AP1Q6ZUJ8 805 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 RSRC2Q7L4I2 434 aaKnown RBP13.74□□□□□ -0.21
DDX4-201ENST00000353507 BLZF1Q9H2G9 400 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 ARFGAP3Q9NP61 516 aa13.74□□□□□ -0.21
DDX4-201ENST00000353507 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
DDX4-201ENST00000353507 ERICH4A6NGS2 130 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 USP17L12C9JPN9 530 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 USP17L21D6R901 530 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 PBX1P40424 430 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 CC2D1AQ6P1N0 951 aaPredicted RBP13.73□□□□□ -0.21
DDX4-201ENST00000353507 CTR9Q6PD62 1173 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 TNFRSF25Q93038 417 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 CCDC51Q96ER9 411 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 IRX2Q9BZI1 471 aaPredicted RBP13.73□□□□□ -0.21
DDX4-201ENST00000353507 TAF1P21675 1872 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 COL4A1P02462 1669 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 SCN7AQ01118 1682 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 STRCQ7RTU9 1775 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 KDM4FA0A1W2PPD8 638 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 N4BP3O15049 544 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 XDHP47989 1333 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 LAMB1P07942 1786 aa13.73□□□□□ -0.21
DDX4-201ENST00000353507 SCG2P13521 617 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 MCM7P33993 719 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 TXLNAP40222 546 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 SPAG1Q07617 926 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 SRBD1Q8N5C6 995 aaKnown RBP13.72□□□□□ -0.21
DDX4-201ENST00000353507 ZSWIM4Q9H7M6 989 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 ITIH6Q6UXX5 1313 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 GYPCP04921 128 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 TRAPPC10P48553 1259 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 CHMP4BP1P59074 171 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 PAK1Q13153 545 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 ITPK1Q13572 414 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 NPY5RQ15761 445 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 JAKMIP3Q5VZ66 844 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 PARD6BQ9BYG5 372 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 CRNKL1Q9BZJ0 848 aaKnown RBP13.72□□□□□ -0.21
DDX4-201ENST00000353507 RREB1Q92766 1687 aa13.72□□□□□ -0.21
DDX4-201ENST00000353507 POLR3GO15318 223 aaPredicted RBP13.71□□□□□ -0.21
DDX4-201ENST00000353507 GTPBP6O43824 516 aaPredicted RBP13.71□□□□□ -0.21
DDX4-201ENST00000353507 COBLO75128 1261 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 FGRP09769 529 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 KRT31Q15323 416 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 DDB1Q16531 1140 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 ZNF569Q5MCW4 686 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 RASGRP2Q7LDG7 609 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 RMND1Q9NWS8 449 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 TTF2Q9UNY4 1162 aaKnown RBP13.71□□□□□ -0.21
DDX4-201ENST00000353507 NMT2O60551 498 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 TBC1D8O95759 1140 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 FXR1P51114 621 aaKnown RBP eCLIP13.71□□□□□ -0.21
DDX4-201ENST00000353507 E2F4Q16254 413 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 KIF4BQ2VIQ3 1234 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 ERFEQ4G0M1 354 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 SRGAP1Q7Z6B7 1085 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 CEP112Q8N8E3 955 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 NUP88Q99567 741 aaPredicted RBP13.71□□□□□ -0.21
DDX4-201ENST00000353507 BSDC1Q9NW68 430 aaPredicted RBP13.71□□□□□ -0.21
DDX4-201ENST00000353507 RWDD2AQ9UIY3 292 aa13.71□□□□□ -0.21
DDX4-201ENST00000353507 CASZ1Q86V15 1759 aa13.71□□□□□ -0.22
DDX4-201ENST00000353507 WTIPA6NIX2 430 aaPredicted RBP13.71□□□□□ -0.22
DDX4-201ENST00000353507 TSPY2A6NKD2 308 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms