RNA–Protein interactions for RNA: ENST00000353479.9

COL17A1-201, Transcript of collagen type XVII alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL17A1, Length 5,734 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-201ENST00000353479 CETN3O15182 167 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 LZTFL1Q9NQ48 299 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 MED14O60244 1454 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 USP17L8P0C7I0 530 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 WDR44Q5JSH3 913 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 NELFCDQ8IXH7 590 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 KRT5P13647 590 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 SERTAD1Q9UHV2 236 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 AGLP35573 1532 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 SNAP23O00161 211 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 SORBS3O60504 671 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 ERCC3P19447 782 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 TECP42680 631 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 MLKLQ8NB16 471 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 USP28Q96RU2 1077 aa16.67■□□□□ 0.26
COL17A1-201ENST00000353479 RGS12O14924 1447 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 USP17L3A6NCW0 530 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 USP17L4A6NCW7 530 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 MCAMP43121 646 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 USP17L1Q7RTZ2 530 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 MIER3Q7Z3K6 550 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 SELENOOQ9BVL4 669 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 SERPINB13Q9UIV8 391 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 CEP83Q9Y592 693 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 CYP2D7A0A087X1C5 515 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 GCNT3O95395 438 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 CKAP4Q07065 602 aaKnown RBP16.66■□□□□ 0.26
COL17A1-201ENST00000353479 CNGA4Q8IV77 575 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 BEGAINQ9BUH8 593 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 NRKQ7Z2Y5 1582 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 KIDINS220Q9ULH0 1771 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 NLRP12P59046 1061 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 LMBR1Q8WVP7 490 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 COA1Q9GZY4 146 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 RBSNQ9H1K0 784 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 MRPL44Q9H9J2 332 aaKnown RBP16.66■□□□□ 0.26
COL17A1-201ENST00000353479 PCDHA1Q9Y5I3 950 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 PRPHP41219 470 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 ZNF354CQ86Y25 554 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 GLG1Q92896 1179 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 MTMR6Q9Y217 621 aa16.66■□□□□ 0.26
COL17A1-201ENST00000353479 LMAN1P49257 510 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 GNPTABQ3T906 1256 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 NEK8Q86SG6 692 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 ANKRD35Q8N283 1001 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 IGSF22Q8N9C0 903 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 DYNLL2Q96FJ2 89 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 CCPG1Q9ULG6 757 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 AKR1B15C9JRZ8 316 aaPredicted RBP16.65■□□□□ 0.26
COL17A1-201ENST00000353479 TTLL1O95922 423 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 EZRP15311 586 aaKnown RBP16.65■□□□□ 0.26
COL17A1-201ENST00000353479 PNOCQ13519 176 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 APOA5Q6Q788 366 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 NCAPG2Q86XI2 1143 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 PI4K2BQ8TCG2 481 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 LMBRD1Q9NUN5 540 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 KCTD1Q719H9 257 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 CGNQ9P2M7 1197 aaKnown RBP16.65■□□□□ 0.26
COL17A1-201ENST00000353479 HSPA1LP34931 641 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 NT5C3AQ9H0P0 336 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 ADAMTS13Q76LX8 1427 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 ADRA2BP18089 450 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 TXNRD1Q16881 649 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 MINPP1Q9UNW1 487 aa16.65■□□□□ 0.26
COL17A1-201ENST00000353479 CTAGE15A4D2H0 777 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CTAGE8P0CG41 777 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 SLC27A3Q5K4L6 730 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CTAGE6Q86UF2 777 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CTAGE4Q8IX94 777 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CELF1Q92879 486 aaKnown RBP16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CCDC66A2RUB6 948 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CTAGE9A4FU28 777 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 MYZAPP0CAP1 466 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 PFKFB1P16118 471 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 PABPC4Q13310 644 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL17A1-201ENST00000353479 ADALQ6DHV7 355 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 MLXIPQ9HAP2 919 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CARMIL3Q8ND23 1372 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CBX8Q9HC52 389 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 PCDHA12Q9UN75 941 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 DNM2P50570 870 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 CIAPIN1Q6FI81 312 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 MCF2L2Q86YR7 1114 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 ZKSCAN5Q9Y2L8 839 aa16.64■□□□□ 0.25
COL17A1-201ENST00000353479 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 ZBTB7AO95365 584 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 FANCCQ00597 558 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
COL17A1-201ENST00000353479 CCDC50Q8IVM0 306 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 MSANTD4Q8NCY6 345 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 TRIM6Q9C030 488 aaPredicted RBP16.63■□□□□ 0.25
COL17A1-201ENST00000353479 PIM2Q9P1W9 311 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 DDX25Q9UHL0 483 aaKnown RBP16.63■□□□□ 0.25
COL17A1-201ENST00000353479 PKP1Q13835 747 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 NELFBQ8WX92 580 aa16.63■□□□□ 0.25
COL17A1-201ENST00000353479 BAG1Q99933 345 aaPredicted RBP16.63■□□□□ 0.25
COL17A1-201ENST00000353479 SMC1AQ14683 1233 aaKnown RBP16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms